BS20961.complete Sequence
656 bp assembled on 2011-01-18
GenBank Submission: KX803861
> BS20961.complete
GAAGTTATCAGTCGACATGGGTAGTAACCAAGATTGGAACAAGGAAGACT
CCAAAACTGAGGTCCCACCTGAGGAAGATGACCAAGTGACAGCATACATT
GAGAAATCAGTGGCCCAATTGGGCTCCGAAAATGATCACCGTACCGCGCT
GGTCGATGAAAAGAAGAAGGAGTTGGATGTCCTGATTGCCGAGAAGTACA
CCACTTTGAACGACTTAACCCATGTCACCAATTCCCAGAATCTTGTGGAC
GACATCCACTTTCTGCATACGAAGAACGCCAAGATCCTGGAGAGCCTCAA
TCAGGCGGTCACCGCCAAGAGAAACGTCTCCCAGGCCTACGATGACCATT
GCAAGAAGGCGCTCAAGGTCAAGGCCGAGATGCAGGAGCAGACGAAATGC
TTCGATGAGTTCACCGTGATGAACTACCACGATCTAAAGAAGACCATACT
TAACACCAAGAAAGAAACGCAAGAAATTCGCGCTAAGACGGCTTTAAAGA
CCGAGGAGCTCAAAAAGAAGCGAGAATTTGTTAACACCACCCAAAAGTCA
ATGGCTAATGATATCCGTGTTCTAGGCCAGATCGAACATGACCTCATTGG
GATAATCGAAGACTTAAAATCCAAAATTTCTGCAATTTAAAAGCTTTCTA
GACCAT
BS20961.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:16:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cona-RA | 624 | CG7676-PA | 1..624 | 17..640 | 3120 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cona-RA | 857 | CG7676-RA | 95..718 | 17..640 | 3120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18386086..18386386 | 121..421 | 1505 | 100 | Plus |
| 3R | 32079331 | 3R | 18386458..18386634 | 421..597 | 885 | 100 | Plus |
| 3R | 32079331 | 3R | 18385922..18386027 | 17..122 | 530 | 100 | Plus |
| 3R | 32079331 | 3R | 18386706..18386748 | 598..640 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:16:02 has no hits.
BS20961.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:39 Download gff for
BS20961.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cona-RA | 95..716 | 17..638 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:07 Download gff for
BS20961.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cona-RA | 95..716 | 17..638 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:07 Download gff for
BS20961.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cona-RA | 95..716 | 17..638 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:07 Download gff for
BS20961.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18386459..18386634 | 422..597 | 100 | -> | Plus |
| 3R | 18386706..18386746 | 598..638 | 100 | | Plus |
| 3R | 18385922..18386026 | 17..121 | 100 | -> | Plus |
| 3R | 18386087..18386386 | 122..421 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:07 Download gff for
BS20961.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14211644..14211748 | 17..121 | 100 | -> | Plus |
| arm_3R | 14211809..14212108 | 122..421 | 100 | -> | Plus |
| arm_3R | 14212181..14212356 | 422..597 | 100 | -> | Plus |
| arm_3R | 14212428..14212468 | 598..638 | 100 | | Plus |
BS20961.pep Sequence
Translation from 16 to 639
> BS20961.pep
MGSNQDWNKEDSKTEVPPEEDDQVTAYIEKSVAQLGSENDHRTALVDEKK
KELDVLIAEKYTTLNDLTHVTNSQNLVDDIHFLHTKNAKILESLNQAVTA
KRNVSQAYDDHCKKALKVKAEMQEQTKCFDEFTVMNYHDLKKTILNTKKE
TQEIRAKTALKTEELKKKREFVNTTQKSMANDIRVLGQIEHDLIGIIEDL
KSKISAI*
BS20961.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cona-PA | 207 | CG7676-PA | 1..207 | 1..207 | 1052 | 100 | Plus |
