BS20967.complete Sequence
842 bp assembled on 2011-01-18
GenBank Submission: KX802813
> BS20967.complete
GAAGTTATCAGTCGACATGTCCCACAAGAGATTCTACGTAAAGTTAGATC
TGCAGCTCCATGCGCTCACTTGTCCCGGTGTTTGGCTTTGTTCACACGGA
TATTTGGAGGCCACCATCAAGACCTTGGGCTACTACTTTCGAACTGGACC
CATGGAGCCTCGCTTTCCGATGCTGTGCCACGATCAGTTCACGATGGAGG
GATACTTCAAGAGCGTGGGCTGCCTGGAGGAGATGCACGAGCTACTGAAA
GCTGAACAGCTGGAGATAACCGTCTGGCAGAATGGCCGAAGGTTGGCCTA
CTTCGTGGGCAGTCTTTCGGATGTGATGCAACCCACTTTTCCGCGCCTGA
GCTGTGCCCACAGCTCCAATGTTCAGCTGTTGATGAAGGCGACGCCTGCT
TTTCCGGGTATCCTGGCGCCCAAGGTGGAGCTATCTGCGCAGTTGACCAC
GCAGGATCGGAAAAAGGTGTGCAGCTGCTCCAGTTCCAGGGAGTACTCTG
CTCCTCCTGTCAATCGCCACGTTGAGAGCCGTTGCCTGGGCCATTTGGAT
CAGCCTCGAAAGCAGCAAACCGTGTGTCATGGGAGGCAATCCAATTGTTG
TCCAAGTGGCAGTTACGCCGCTTGGAGAGCTGGCTCTCCTGCCCAACAGA
AACAGCAGGAACGGCGATTGTCCTCCTGCTCCAGCACAACGCAATTAAGT
AGCCTTAGCCAGAGTTCCTCGCTGACGCAGTGCAGCCACTTGTCCAGCTG
TAGTTCTCCTTTGGATGAGCATCACAACAGCTGCGATATATGCCAGGCCT
ACAGGCGCATGTTTCCTTCTTACTGAAAGCTTTCTAGACCAT
BS20967.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:16:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14079-RA | 810 | CG14079-PA | 1..810 | 17..826 | 4050 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14079-RA | 1008 | CG14079-RA | 165..975 | 17..827 | 4055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19098268..19099031 | 64..827 | 3820 | 100 | Plus |
3L | 28110227 | 3L | 19098163..19098210 | 17..64 | 240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:16:14 has no hits.
BS20967.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:40 Download gff for
BS20967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14079-RA | 165..973 | 17..825 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:14 Download gff for
BS20967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14079-RA | 165..973 | 17..825 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:12 Download gff for
BS20967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14079-RA | 165..973 | 17..825 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:12 Download gff for
BS20967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19098163..19098210 | 17..64 | 100 | -> | Plus |
3L | 19098269..19099029 | 65..825 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:14 Download gff for
BS20967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19091263..19091310 | 17..64 | 100 | -> | Plus |
arm_3L | 19091369..19092129 | 65..825 | 100 | | Plus |
BS20967.pep Sequence
Translation from 16 to 825
> BS20967.pep
MSHKRFYVKLDLQLHALTCPGVWLCSHGYLEATIKTLGYYFRTGPMEPRF
PMLCHDQFTMEGYFKSVGCLEEMHELLKAEQLEITVWQNGRRLAYFVGSL
SDVMQPTFPRLSCAHSSNVQLLMKATPAFPGILAPKVELSAQLTTQDRKK
VCSCSSSREYSAPPVNRHVESRCLGHLDQPRKQQTVCHGRQSNCCPSGSY
AAWRAGSPAQQKQQERRLSSCSSTTQLSSLSQSSSLTQCSHLSSCSSPLD
EHHNSCDICQAYRRMFPSY*
BS20967.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14079-PA | 269 | CG14079-PA | 1..269 | 1..269 | 1454 | 100 | Plus |