Clone BS20967 Report

Search the DGRC for BS20967

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:209
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG14079-RA
Protein status:BS20967.pep: full length peptide match
Sequenced Size:842

Clone Sequence Records

BS20967.complete Sequence

842 bp assembled on 2011-01-18

GenBank Submission: KX802813

> BS20967.complete
GAAGTTATCAGTCGACATGTCCCACAAGAGATTCTACGTAAAGTTAGATC
TGCAGCTCCATGCGCTCACTTGTCCCGGTGTTTGGCTTTGTTCACACGGA
TATTTGGAGGCCACCATCAAGACCTTGGGCTACTACTTTCGAACTGGACC
CATGGAGCCTCGCTTTCCGATGCTGTGCCACGATCAGTTCACGATGGAGG
GATACTTCAAGAGCGTGGGCTGCCTGGAGGAGATGCACGAGCTACTGAAA
GCTGAACAGCTGGAGATAACCGTCTGGCAGAATGGCCGAAGGTTGGCCTA
CTTCGTGGGCAGTCTTTCGGATGTGATGCAACCCACTTTTCCGCGCCTGA
GCTGTGCCCACAGCTCCAATGTTCAGCTGTTGATGAAGGCGACGCCTGCT
TTTCCGGGTATCCTGGCGCCCAAGGTGGAGCTATCTGCGCAGTTGACCAC
GCAGGATCGGAAAAAGGTGTGCAGCTGCTCCAGTTCCAGGGAGTACTCTG
CTCCTCCTGTCAATCGCCACGTTGAGAGCCGTTGCCTGGGCCATTTGGAT
CAGCCTCGAAAGCAGCAAACCGTGTGTCATGGGAGGCAATCCAATTGTTG
TCCAAGTGGCAGTTACGCCGCTTGGAGAGCTGGCTCTCCTGCCCAACAGA
AACAGCAGGAACGGCGATTGTCCTCCTGCTCCAGCACAACGCAATTAAGT
AGCCTTAGCCAGAGTTCCTCGCTGACGCAGTGCAGCCACTTGTCCAGCTG
TAGTTCTCCTTTGGATGAGCATCACAACAGCTGCGATATATGCCAGGCCT
ACAGGCGCATGTTTCCTTCTTACTGAAAGCTTTCTAGACCAT

BS20967.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:16:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG14079-RA 810 CG14079-PA 1..810 17..826 4050 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14079-RA 1008 CG14079-RA 165..975 17..827 4055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19098268..19099031 64..827 3820 100 Plus
3L 28110227 3L 19098163..19098210 17..64 240 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:16:14 has no hits.

BS20967.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:40 Download gff for BS20967.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 165..973 17..825 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:14 Download gff for BS20967.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 165..973 17..825 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:12 Download gff for BS20967.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 165..973 17..825 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:12 Download gff for BS20967.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19098163..19098210 17..64 100 -> Plus
3L 19098269..19099029 65..825 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:14 Download gff for BS20967.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19091263..19091310 17..64 100 -> Plus
arm_3L 19091369..19092129 65..825 100   Plus

BS20967.pep Sequence

Translation from 16 to 825

> BS20967.pep
MSHKRFYVKLDLQLHALTCPGVWLCSHGYLEATIKTLGYYFRTGPMEPRF
PMLCHDQFTMEGYFKSVGCLEEMHELLKAEQLEITVWQNGRRLAYFVGSL
SDVMQPTFPRLSCAHSSNVQLLMKATPAFPGILAPKVELSAQLTTQDRKK
VCSCSSSREYSAPPVNRHVESRCLGHLDQPRKQQTVCHGRQSNCCPSGSY
AAWRAGSPAQQKQQERRLSSCSSTTQLSSLSQSSSLTQCSHLSSCSSPLD
EHHNSCDICQAYRRMFPSY*

BS20967.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14079-PA 269 CG14079-PA 1..269 1..269 1454 100 Plus