BS20968.complete Sequence
794 bp assembled on 2011-01-18
GenBank Submission: KX804912
> BS20968.complete
GAAGTTATCAGTCGACATGGAGGGTTTCGAGTATGTGGTCAATCCTCCAG
TATGGCCGAAAGTCGGATTTCTCAGGAAAATCCATCGGGACTCGAGCGGA
GACTTCTGTAGGGACAGCTACACCAAAAATATTCCGTCGGTCGCTCCTAA
TACGTATGATGTTCCCAGACCAATGGGATTTAAGTACCCGTCAAAGGCAG
GATTTTCTGCCTTGGCCAACAAGATGCCACGATTACCAATCTTTCGAGAA
CTGGGATATCCCCCTATTGGATCCTACGCTACCGATTTTCCAGGAACTCA
ATACTACTTCACTTTCAACAAGCAAACTGTGCGTGAACAAAAATGGTTGA
CACCCGGGCCGTCAACCTATACGCACCACCTCAAATATCCGGACTGGGAC
GTGGAGACAGCTTTCGGATCCAAGCGCATCATCTGGCCAGCAGTGGCCGT
ATTTTGCAGTCCCCAAAACATTGTCAAATGCTCGACATGTGGCGAAAAGC
CAGTGGGTGACTATTTTCACAACTTTAGCAATGACGCGGACATGTGCCGA
CAATGCATGCATGTCGAGATGGCGGCGATCAAGAAGTGCAATCTTCAGGT
GACGGAGCGGTATAGTCGGCAGCAGAAAATCAAGCAATTCGTACCGGCCA
GATACTGCGGATTCTTCCACGATCACAACCAAACTACGGCCACAATTGAA
CGGGATTCGCGAAAAGTGCTGCGCCAAAAGATACGCGTGGAAAATTACTT
GTATCGGCTGAATGCAAAGATAGAATAGAAGCTTTCTAGACCAT
BS20968.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:16:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15125-RA | 762 | CG15125-PA | 1..762 | 17..778 | 3810 | 100 | Plus |
CG15125-RB | 849 | CG15125-PB | 94..849 | 23..778 | 3780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15125-RA | 1071 | CG15125-RA | 298..1060 | 17..779 | 3815 | 100 | Plus |
CG15125-RB | 886 | CG15125-RB | 119..875 | 23..779 | 3785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19659166..19659588 | 357..779 | 2115 | 100 | Plus |
2R | 25286936 | 2R | 19658909..19659084 | 183..358 | 880 | 100 | Plus |
2R | 25286936 | 2R | 19658660..19658821 | 23..184 | 810 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:16:18 has no hits.
BS20968.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:41 Download gff for
BS20968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15125-RA | 113..874 | 17..778 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:16 Download gff for
BS20968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15125-RA | 298..1059 | 17..778 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:14 Download gff for
BS20968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15125-RA | 298..1059 | 17..778 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:14 Download gff for
BS20968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19658655..19658821 | 17..184 | 98 | -> | Plus |
2R | 19658911..19659083 | 185..357 | 100 | -> | Plus |
2R | 19659167..19659587 | 358..778 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:16 Download gff for
BS20968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15546160..15546326 | 17..184 | 98 | -> | Plus |
arm_2R | 15546416..15546588 | 185..357 | 100 | -> | Plus |
arm_2R | 15546672..15547092 | 358..778 | 100 | | Plus |
BS20968.pep Sequence
Translation from 16 to 777
> BS20968.pep
MEGFEYVVNPPVWPKVGFLRKIHRDSSGDFCRDSYTKNIPSVAPNTYDVP
RPMGFKYPSKAGFSALANKMPRLPIFRELGYPPIGSYATDFPGTQYYFTF
NKQTVREQKWLTPGPSTYTHHLKYPDWDVETAFGSKRIIWPAVAVFCSPQ
NIVKCSTCGEKPVGDYFHNFSNDADMCRQCMHVEMAAIKKCNLQVTERYS
RQQKIKQFVPARYCGFFHDHNQTTATIERDSRKVLRQKIRVENYLYRLNA
KIE*
BS20968.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15125-PA | 253 | CG15125-PA | 1..253 | 1..253 | 1398 | 100 | Plus |
CG15125-PB | 282 | CG15125-PB | 32..282 | 3..253 | 1388 | 100 | Plus |