BS20972.complete Sequence
977 bp assembled on 2011-01-18
GenBank Submission: KX801888
> BS20972.complete
GAAGTTATCAGTCGACATGGCATCTGGGTTCGTGAACAATAAGCGCAAGC
GGGATGAAGCGCACAATCAGTTCATCTGTCCCATTGTCTACACAAATGAG
TTGCCCACTTATCCAAAGGATTGCAAGTTTCTGCCCTGTGGCCAGAATAT
CCAGGAGTACTGCAAGGAGCCGGTTTCGATTCCCAAACTGGACACTTGTT
TTTCGCTAAATTTCAAAGGACTTCATGAGCTATTCTCCGTTAATTTGATG
GATCAGTCGGCTTACGATAAGCTTTCCGAGAATGTGCAGCCAATGAATCC
CAGAGAAGCTGATCTACTTAAGGACATAAGAGCCCTAGACTGGGACTTCG
CCAGACTCGAACCAAGTCGCGCTCAGGAATGCGCCAAGATGTTCGCCAAG
GAGCGAGTGCATCCACCTCTCCCAGGACTACAGCGTTCTGTGGCGGTGCC
CAAGGCCCCAAAAGACCTGCAGCCGGTCAGCCTGGAGCAACAAAAGGCGA
TGATTGATGCGAGCTTCAAGGATATTGGCAAACCCCTCTACCGACATCCC
ACCAATCCGGGTAGCAATGCCTACCCTGTGCAGGTCTTGCCAGTCTTTCC
CGATACGGATTTGCAGAAATATAGCTTCGTCCAGATGAGTTTTGATAATC
CACCCCAAAATAGCAACCAGGGACTAATCAGGGACTGCGGAAGCTGTCTG
ATCAACTTCAGTTTCGTCCAGGACATTGCGGACTCTACCGAAAAGGTTTA
CGTATCCGACCATCGCTACAGAGAGGAAAAAGCCGACGATAGCTTGGAGC
GCGGTGAGGGTTACATACTCCGCGAGGAGAATGACGCCATCTTTTACGTT
GGTGTCGACAAATACATCAAATTAAGGCGGGAACGTCCACGCCCACACGT
TTCGGCTAACAAGTTTCTGCTGAAGGTCCAGCGTGTGGGAATGAATACAA
CTACCGATTAAAAGCTTTCTAGACCAT
BS20972.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:15:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12674-RA | 945 | CG12674-PA | 1..945 | 17..961 | 4725 | 100 | Plus |
CG12674-RB | 942 | CG12674-PB | 1..942 | 17..961 | 4645 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12674-RA | 1219 | CG12674-RA | 159..1104 | 17..962 | 4730 | 100 | Plus |
CG12674-RB | 1216 | CG12674-RB | 159..1101 | 17..962 | 4650 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2080208..2081066 | 64..922 | 4295 | 100 | Plus |
2L | 23513712 | 2L | 2080077..2080123 | 17..63 | 235 | 100 | Plus |
2L | 23513712 | 2L | 2081131..2081171 | 922..962 | 205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:15:57 has no hits.
BS20972.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:38 Download gff for
BS20972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12674-RA | 101..1043 | 17..959 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:04 Download gff for
BS20972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12674-RA | 159..1101 | 17..959 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:05 Download gff for
BS20972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12674-RA | 159..1101 | 17..959 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:05 Download gff for
BS20972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2080077..2080123 | 17..63 | 100 | -> | Plus |
2L | 2080208..2081066 | 64..922 | 100 | -> | Plus |
2L | 2081132..2081168 | 923..959 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:04 Download gff for
BS20972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2080077..2080123 | 17..63 | 100 | -> | Plus |
arm_2L | 2080208..2081066 | 64..922 | 100 | -> | Plus |
arm_2L | 2081132..2081168 | 923..959 | 100 | | Plus |
BS20972.pep Sequence
Translation from 16 to 960
> BS20972.pep
MASGFVNNKRKRDEAHNQFICPIVYTNELPTYPKDCKFLPCGQNIQEYCK
EPVSIPKLDTCFSLNFKGLHELFSVNLMDQSAYDKLSENVQPMNPREADL
LKDIRALDWDFARLEPSRAQECAKMFAKERVHPPLPGLQRSVAVPKAPKD
LQPVSLEQQKAMIDASFKDIGKPLYRHPTNPGSNAYPVQVLPVFPDTDLQ
KYSFVQMSFDNPPQNSNQGLIRDCGSCLINFSFVQDIADSTEKVYVSDHR
YREEKADDSLERGEGYILREENDAIFYVGVDKYIKLRRERPRPHVSANKF
LLKVQRVGMNTTTD*
BS20972.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:03:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12674-PA | 314 | CG12674-PA | 1..314 | 1..314 | 1672 | 100 | Plus |
CG12674-PB | 313 | CG12674-PB | 1..313 | 1..314 | 1655 | 99.7 | Plus |