BS20975.complete Sequence
701 bp assembled on 2011-01-18
GenBank Submission: KX800437
> BS20975.complete
GAAGTTATCAGTCGACATGGCCCCCAACGATCCATCGCATCCTGGTGGAA
AGTCAACCGCCGTGGCGATGGCCACCAGCCACACCATCTCATACGTGCAA
TGCCAGAACCTCAAATACAACGTCATTATCCTCGGCTGGCTGGGCGTGAT
CATCTCCACCGTCATCTTGGGCAGCTCGGCGCTGACCATCCACTTTCGTC
CGGACATCGAGCTGCTGCTAAACCAGTGGCCCATGAACTTGGTCCCGGTC
GCAGAACAGCAGCTACTGATCAATTTGTTGACCATCTTTAGCTCCATTGT
GTACGGACTGTCGCTGATCAACATGGGCGTCAGTCTGCTGCTGCTGATTG
GTATTGCCCGGGACTCAAGCTGCCTAATTTATCCTTGGCTGATCTATCAT
GGCGTTATTTTTGGCTTTGGTCTTTACTTGGGGGTTTTCTACGCGACCGC
AGGTCTGTTCATTGACCTGTCGAGCTTTCTAATGTGTCTTCTGGTGTTCA
ACCTTGTGCTGGTTATATTTTATAAGATCTATCACGAGGTCTTCACCCTA
TTTCGCGTGATGGAGCAGCTGTCGAAGGATGGCGGAATGGGCGGACTCTA
CTACCAGGATGCGGAGCATGGATGGACTGCGGCTGGGGTTCCCTTTCAAC
ATGTCTATGTGCCGCGTCTGCCGATGCAAAAGTAAAAGCTTTCTAGACCA
T
BS20975.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:16:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13747-RA | 669 | CG13747-PA | 1..669 | 17..685 | 3345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13747-RA | 979 | CG13747-RA | 151..821 | 15..685 | 3355 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9017965..9018225 | 15..275 | 1305 | 100 | Plus |
2R | 25286936 | 2R | 9018701..9018874 | 512..685 | 870 | 100 | Plus |
2R | 25286936 | 2R | 9018497..9018648 | 361..512 | 760 | 100 | Plus |
2R | 25286936 | 2R | 9018290..9018376 | 276..362 | 435 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:16:44 has no hits.
BS20975.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:45 Download gff for
BS20975.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13747-RA | 113..773 | 17..677 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:28 Download gff for
BS20975.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13747-RA | 153..813 | 17..677 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:23 Download gff for
BS20975.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13747-RA | 153..813 | 17..677 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:23 Download gff for
BS20975.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9018702..9018866 | 513..677 | 100 | | Plus |
2R | 9017967..9018225 | 17..275 | 100 | -> | Plus |
2R | 9018290..9018375 | 276..361 | 100 | -> | Plus |
2R | 9018498..9018648 | 362..512 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:28 Download gff for
BS20975.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4905472..4905730 | 17..275 | 100 | -> | Plus |
arm_2R | 4905795..4905880 | 276..361 | 100 | -> | Plus |
arm_2R | 4906003..4906153 | 362..512 | 100 | -> | Plus |
arm_2R | 4906207..4906371 | 513..677 | 100 | | Plus |
BS20975.pep Sequence
Translation from 16 to 684
> BS20975.pep
MAPNDPSHPGGKSTAVAMATSHTISYVQCQNLKYNVIILGWLGVIISTVI
LGSSALTIHFRPDIELLLNQWPMNLVPVAEQQLLINLLTIFSSIVYGLSL
INMGVSLLLLIGIARDSSCLIYPWLIYHGVIFGFGLYLGVFYATAGLFID
LSSFLMCLLVFNLVLVIFYKIYHEVFTLFRVMEQLSKDGGMGGLYYQDAE
HGWTAAGVPFQHVYVPRLPMQK*
BS20975.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:04:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13747-PA | 222 | CG13747-PA | 1..222 | 1..222 | 1155 | 100 | Plus |
CG15098-PA | 186 | CG15098-PA | 2..160 | 24..183 | 156 | 26.4 | Plus |