Clone BS20979 Report

Search the DGRC for BS20979

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:209
Well:79
Vector:pDNR-Dual
Associated Gene/TranscriptCG14579-RA
Protein status:BS20979.pep: full length peptide match
Sequenced Size:824

Clone Sequence Records

BS20979.complete Sequence

824 bp assembled on 2011-01-18

GenBank Submission: KX801679

> BS20979.complete
GAAGTTATCAGTCGACATGACCATAATGGCTATATCAAACGACACATTTG
AAAATGAACAGCAGGTGGCGGTAAGGCAAGAAGCACCCAATGCCATTGGT
AACATCCCGGATGTGGTGGAGTCGGCTTCCCGCCCACAAAAATACACGTT
CCATGAGATCTATCAGATGATTACAGCCCTCACCTGGCCCCGAATTCTGT
TTGATTTGCTCGTGCGCCACGAGTGGAACTCCATCTTTTTGAGCCTAGGC
TTTCTTATCCTCAATGCCTTCGAGGTCCTTCAAAGCTTCAATCTGTTGCA
ACAGCTGGCTGTAGTCGGCATGATGATCCTGAGCAACATAATGATCTACA
AGGCCATCCGGCCGTATGTGCGATTCCATCTTTACGAGCGTCTGATCCGC
GCCGATTTCAATGTGCACATCACCCAGGAAATGGTTGTGCGCGTGGTCAA
CTGTGTAAATCGCTGCTTGGTCACGCTGCATTGCATCCTCTTTCAAACTG
AAATCTTCGAGCTCTTTTTGATGATGCTTGCCCTGGAGGCAGTGCGTAAC
ATCATCTGGTATACTAACATCTTCTTGCTAATTAGGATCGTCTTATGTGT
GACGTTGTTTTTTCCAAGGCTTTTCGATAATGATATTGATAATGCGTCGA
GCAGAGCCTATTATCAGATATGTGTGCTGCAGATCGTTGACAAGCTTGAG
GAGATAGGCGTGGAGGTGCATCTAGGCATCATTGAGCGCTGGAAGCAGGA
AGTGGATGCCATGAGGGAGTTGTATTACGAGATTGAGGACTGGCCAAACC
AAGAGTAGAAGCTTTCTAGACCAT

BS20979.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:16:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG14579-RA 792 CG14579-PA 1..792 17..808 3960 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14579-RA 1156 CG14579-RA 131..922 17..808 3960 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21193383..21193956 17..590 2870 100 Plus
X 23542271 X 21194069..21194287 590..808 1095 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:16:54 has no hits.

BS20979.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:46 Download gff for BS20979.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 131..922 17..808 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:32 Download gff for BS20979.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 131..922 17..808 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:26 Download gff for BS20979.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 131..922 17..808 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:26 Download gff for BS20979.complete
Subject Subject Range Query Range Percent Splice Strand
X 21193383..21193956 17..590 100 -> Plus
X 21194070..21194287 591..808 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:32 Download gff for BS20979.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21064410..21064983 17..590 100 -> Plus
arm_X 21065097..21065314 591..808 100   Plus

BS20979.pep Sequence

Translation from 16 to 807

> BS20979.pep
MTIMAISNDTFENEQQVAVRQEAPNAIGNIPDVVESASRPQKYTFHEIYQ
MITALTWPRILFDLLVRHEWNSIFLSLGFLILNAFEVLQSFNLLQQLAVV
GMMILSNIMIYKAIRPYVRFHLYERLIRADFNVHITQEMVVRVVNCVNRC
LVTLHCILFQTEIFELFLMMLALEAVRNIIWYTNIFLLIRIVLCVTLFFP
RLFDNDIDNASSRAYYQICVLQIVDKLEEIGVEVHLGIIERWKQEVDAMR
ELYYEIEDWPNQE*

BS20979.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:04:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG14579-PA 263 CG14579-PA 1..263 1..263 1356 100 Plus