BS20979.complete Sequence
824 bp assembled on 2011-01-18
GenBank Submission: KX801679
> BS20979.complete
GAAGTTATCAGTCGACATGACCATAATGGCTATATCAAACGACACATTTG
AAAATGAACAGCAGGTGGCGGTAAGGCAAGAAGCACCCAATGCCATTGGT
AACATCCCGGATGTGGTGGAGTCGGCTTCCCGCCCACAAAAATACACGTT
CCATGAGATCTATCAGATGATTACAGCCCTCACCTGGCCCCGAATTCTGT
TTGATTTGCTCGTGCGCCACGAGTGGAACTCCATCTTTTTGAGCCTAGGC
TTTCTTATCCTCAATGCCTTCGAGGTCCTTCAAAGCTTCAATCTGTTGCA
ACAGCTGGCTGTAGTCGGCATGATGATCCTGAGCAACATAATGATCTACA
AGGCCATCCGGCCGTATGTGCGATTCCATCTTTACGAGCGTCTGATCCGC
GCCGATTTCAATGTGCACATCACCCAGGAAATGGTTGTGCGCGTGGTCAA
CTGTGTAAATCGCTGCTTGGTCACGCTGCATTGCATCCTCTTTCAAACTG
AAATCTTCGAGCTCTTTTTGATGATGCTTGCCCTGGAGGCAGTGCGTAAC
ATCATCTGGTATACTAACATCTTCTTGCTAATTAGGATCGTCTTATGTGT
GACGTTGTTTTTTCCAAGGCTTTTCGATAATGATATTGATAATGCGTCGA
GCAGAGCCTATTATCAGATATGTGTGCTGCAGATCGTTGACAAGCTTGAG
GAGATAGGCGTGGAGGTGCATCTAGGCATCATTGAGCGCTGGAAGCAGGA
AGTGGATGCCATGAGGGAGTTGTATTACGAGATTGAGGACTGGCCAAACC
AAGAGTAGAAGCTTTCTAGACCAT
BS20979.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:16:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14579-RA | 792 | CG14579-PA | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14579-RA | 1156 | CG14579-RA | 131..922 | 17..808 | 3960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21193383..21193956 | 17..590 | 2870 | 100 | Plus |
X | 23542271 | X | 21194069..21194287 | 590..808 | 1095 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:16:54 has no hits.
BS20979.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:46 Download gff for
BS20979.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14579-RA | 131..922 | 17..808 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:32 Download gff for
BS20979.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14579-RA | 131..922 | 17..808 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:26 Download gff for
BS20979.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14579-RA | 131..922 | 17..808 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:26 Download gff for
BS20979.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21193383..21193956 | 17..590 | 100 | -> | Plus |
X | 21194070..21194287 | 591..808 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:32 Download gff for
BS20979.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21064410..21064983 | 17..590 | 100 | -> | Plus |
arm_X | 21065097..21065314 | 591..808 | 100 | | Plus |
BS20979.pep Sequence
Translation from 16 to 807
> BS20979.pep
MTIMAISNDTFENEQQVAVRQEAPNAIGNIPDVVESASRPQKYTFHEIYQ
MITALTWPRILFDLLVRHEWNSIFLSLGFLILNAFEVLQSFNLLQQLAVV
GMMILSNIMIYKAIRPYVRFHLYERLIRADFNVHITQEMVVRVVNCVNRC
LVTLHCILFQTEIFELFLMMLALEAVRNIIWYTNIFLLIRIVLCVTLFFP
RLFDNDIDNASSRAYYQICVLQIVDKLEEIGVEVHLGIIERWKQEVDAMR
ELYYEIEDWPNQE*
BS20979.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:04:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14579-PA | 263 | CG14579-PA | 1..263 | 1..263 | 1356 | 100 | Plus |