Clone BS20984 Report

Search the DGRC for BS20984

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:209
Well:84
Vector:pDNR-Dual
Associated Gene/TranscriptCG15877-RA
Protein status:BS20984.pep: full length peptide match
Sequenced Size:866

Clone Sequence Records

BS20984.complete Sequence

866 bp assembled on 2011-01-18

GenBank Submission: KX805013

> BS20984.complete
GAAGTTATCAGTCGACATGGCCCGCACTGAACTGGAGAAAAAGGTCAAGC
GCCAGGGCAAAAAACGCAAGCACGAGGTGACTAAGAACCCTGAGCATGCG
GCCAGCGACGACGAGGTGGCCAACAAAAGTCTAATTCTAGCTCCACAGGT
AGATCAACAGGAGGTTCCAACAGATAAACCCGCCAAGAGGCGGCATAAAG
AATCAGAAGTATCGGCCACTAAGAAACAAAGCAGGAAAAACCAAGCGGAG
GAGCAGGTGGCCACCAGTGGAAGCGATGAAAGTCTTCCTCAGAAGCCTCA
GAAGAGAAAACAAGTCCAGGATGCCAACGAAACCAAAAAGCTGAAACGCA
GCAAAACGCAGGAAAATAACTCGGATGAAGACGACGATGTGGACTCCCAG
CCCACAGCAGCGCAACTAAAAGAAGCAGCTCGTCCGGAGAACGCTTATGC
AGTGGTTACAGTGCGCCAAAAGAAGAAACAGAAGCACCAGCAGCGCCTCG
AGGCCCAAAAGAGTCAGAGCTCCAACAAAGATGCCAAAGTCAACAAGGAA
TATCTTCTAAAATGGAAGGAATCCCGCCAGGATTGGAAGTTCAACAAACT
GCGACAGATTTCCATACAACAAACCGCCTTTGATGTGGAGAAACTGGATG
ACGAGCTGTGGCCAACTGCTCTGGAGTATTTGGCCAGTTCCCAGGGAGCA
GCGCGCTCAAAGATCAGTCAGTTGGCCGAGGAGGTGATCCAGAAACTGGA
CAAGGAGGGCGAAAAGCTGGAGGACGAGGCGGAAAGGCGAAAGCTAATCG
AGTCCACGCAGTACCGGCGGGCACGCGATCTCCTCCAAAGCTTCGACTAG
AAGCTTTCTAGACCAT

BS20984.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:16:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG15877-RA 834 CG15877-PA 1..834 17..850 4170 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG15877-RA 1018 CG15877-RA 125..958 17..850 4170 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2376544..2377224 850..170 3405 100 Minus
3L 28110227 3L 2377276..2377432 173..17 785 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:16:31 has no hits.

BS20984.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:43 Download gff for BS20984.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 125..958 17..850 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:21 Download gff for BS20984.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 125..958 17..850 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:18 Download gff for BS20984.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 125..958 17..850 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:18 Download gff for BS20984.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2376544..2377220 174..850 100 <- Minus
3L 2377276..2377432 17..173 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:21 Download gff for BS20984.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2377276..2377432 17..173 100   Minus
arm_3L 2376544..2377220 174..850 100 <- Minus

BS20984.pep Sequence

Translation from 16 to 849

> BS20984.pep
MARTELEKKVKRQGKKRKHEVTKNPEHAASDDEVANKSLILAPQVDQQEV
PTDKPAKRRHKESEVSATKKQSRKNQAEEQVATSGSDESLPQKPQKRKQV
QDANETKKLKRSKTQENNSDEDDDVDSQPTAAQLKEAARPENAYAVVTVR
QKKKQKHQQRLEAQKSQSSNKDAKVNKEYLLKWKESRQDWKFNKLRQISI
QQTAFDVEKLDDELWPTALEYLASSQGAARSKISQLAEEVIQKLDKEGEK
LEDEAERRKLIESTQYRRARDLLQSFD*

BS20984.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:04:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG15877-PA 277 CG15877-PA 1..277 1..277 1389 100 Plus