BS20985.complete Sequence
692 bp assembled on 2011-01-18
GenBank Submission: KX806451
> BS20985.complete
GAAGTTATCAGTCGACATGGCTTGTGGCAGTGAAGCGATCATCATGAAGT
TTCCCATGCACATGCGTGCCCATCTCCTGGCCGTCCTAAACGATTTTCGG
AATACCGTGGCTAAGGGTCAGTATCCGCACTTGCGTCCAGCTTCCCGGAT
GGCAACACTCCGGTGGCACGAGGAACTGGCCGGGTTGGCCAAGTTTGCCT
TGAGGCGTTGTGACTATATAGACGATTACTGCAGCAATACGGATGAGTTC
AGCTATGTGTCGTATATATATGGCAGTACCAAGTGGTTGCAACTGGAGAA
GGATCCCATATCCGTTTTGGACTTTGTCTTGCAGTTTTGGATGGATGATG
TTAAGGGCTGCACGATGGCCCACATCAATGCCGAGAAACCGGCCAAGGAT
GGACAGTGTCGCGGCTACTTCACCCAGCTGGTCCAAGATTTGGCTGCCCA
TGTCGGCTGTGCCATGATGCTGCGAAAAGGCCAAACGAGCGGACTCTATC
AGTACGGTGTCCTATGTCACTTTTCGCGCGGAAAGATCGCCAATGAGCTG
GTCTACCGGGCAAGTGCTCATCCGGGAAGTCGCTGCTATGCGGGAACCCA
CTCCATATATGAGGGGCTCTGCTCACCCGAGGAGCATGTTAATCCCAATG
CCCTGCAATTGGGCGAGCTTAATTGAAAGCTTTCTAGACCAT
BS20985.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:17:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30486-RB | 660 | CG30486-PB | 1..660 | 17..676 | 3300 | 100 | Plus |
| CG30486-RA | 792 | CG30486-PA | 138..792 | 22..676 | 3275 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30486-RB | 845 | CG30486-RB | 147..806 | 17..676 | 3300 | 100 | Plus |
| CG30486-RA | 859 | CG30486-RA | 166..820 | 22..676 | 3275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12848398..12848778 | 402..22 | 1905 | 100 | Minus |
| 2R | 25286936 | 2R | 12848073..12848347 | 676..402 | 1375 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:17:07 has no hits.
BS20985.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:48 Download gff for
BS20985.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30486-RB | 130..788 | 17..675 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:38 Download gff for
BS20985.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30486-RB | 130..788 | 17..675 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:32 Download gff for
BS20985.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30486-RB | 147..805 | 17..675 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:32 Download gff for
BS20985.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12848398..12848780 | 17..402 | 99 | | Minus |
| 2R | 12848074..12848346 | 403..675 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:38 Download gff for
BS20985.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8735579..8735851 | 403..675 | 100 | <- | Minus |
| arm_2R | 8735903..8736285 | 17..402 | 99 | | Minus |
BS20985.pep Sequence
Translation from 16 to 675
> BS20985.pep
MACGSEAIIMKFPMHMRAHLLAVLNDFRNTVAKGQYPHLRPASRMATLRW
HEELAGLAKFALRRCDYIDDYCSNTDEFSYVSYIYGSTKWLQLEKDPISV
LDFVLQFWMDDVKGCTMAHINAEKPAKDGQCRGYFTQLVQDLAAHVGCAM
MLRKGQTSGLYQYGVLCHFSRGKIANELVYRASAHPGSRCYAGTHSIYEG
LCSPEEHVNPNALQLGELN*
BS20985.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30486-PB | 219 | CG30486-PB | 1..219 | 1..219 | 1187 | 100 | Plus |
| CG30486-PA | 263 | CG30486-PA | 46..263 | 2..219 | 1179 | 99.5 | Plus |
| CG17575-PA | 291 | CG17575-PA | 50..280 | 3..206 | 301 | 29.4 | Plus |
| antr-PA | 265 | CG30488-PA | 42..249 | 3..213 | 287 | 31.5 | Plus |
| antr-PB | 272 | CG30488-PB | 49..256 | 3..213 | 287 | 31.5 | Plus |
