BS20988.complete Sequence
950 bp assembled on 2011-01-28
GenBank Submission: KX804010
> BS20988.complete
GAAGTTATCAGTCGACATGAGTACCTGCCTGGAACGATTTTTCTGTCCCA
ACAAACCTGTCTGCAGCTCGGGCAGAAGAGCCACTTTCTATTATCCTGGA
GGTGGGTCCTACTCTGGCTACTGGTTATGCAACAAACACCAGGGCTGGGG
CGTCAAAAAGACGGCAAAGAGAACTTGCCAGTACTTTTATGGTAAAAAAC
ATCCTGAAGGCCAGCTCATTTATGAGGGAGACTGGGTAATGAACAAACGG
CAGGGAGTCGGATCAATGCTACGCAAACGCGGAACTGAGGTACAGCTGAT
ATATTCGGGAAGATGGTACGATGACATGAAATGTGGAGAAGGTAAGCAAT
TTTATTCAGACGGTTGTGTCTACTTTGGAAAATGGATAAAAAATCGACGG
CACGGTTTGGGCATCCAGTGGTACAACGATGGGAATATTTATGCGGGCGA
ATGGGAAACAGATTTCCGGCATGGACTTGGGGTAATGTTTTACGCTAATG
GAAACCGGTACGAAGGACACTTTGCACGCGGATATAAAAATGGTGAGGGT
GTTTTCTATCATATGCACACGGGACAAATTCAGAAAGGGATGTGGGAAAA
TGATAATTTAAAGACGTCAGTGGTACAGGATGAACCAAAAATCCGTTGTA
ATGCTGTAATAACATCGTATCCGATTCCACGAAACTATCTTAAGTACCCC
AACGAAATAATGCGAGACCTTTTTCAAAGGCACAAAGATTTTAGCAATAA
GCCCCATCGTAGATTCAATGACAGGGTCAGTCTTGCCTTTATTCACCATC
ACCGACAGTACGCCTCCTGCGAAGAGCGCTTCGCTTCACCAACAATTGTA
GACCTCTACCCCAGAGCTGAGTTTGGATGCACTTGCGACTGCGAAAATGT
TGCCAGAAACGAAACCAATATTAGTCAGATATAAAAGCTTTCTAGACCAT
BS20988.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:31:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30429-RA | 918 | CG30429-PA | 1..918 | 17..934 | 4590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:31:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30429-RA | 1060 | CG30429-RA | 63..980 | 17..934 | 4590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:31:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 25246529..25247006 | 17..494 | 2390 | 100 | Plus |
| 2R | 25286936 | 2R | 25247064..25247504 | 494..934 | 2205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:31:29 has no hits.
BS20988.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:31:45 Download gff for
BS20988.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30429-RA | 63..978 | 17..932 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:00:53 Download gff for
BS20988.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30429-RA | 63..978 | 17..932 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:03:28 Download gff for
BS20988.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30429-RA | 63..978 | 17..932 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:03:28 Download gff for
BS20988.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 25246529..25247006 | 17..494 | 100 | -> | Plus |
| 2R | 25247065..25247502 | 495..932 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:00:53 Download gff for
BS20988.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 21134052..21134529 | 17..494 | 100 | -> | Plus |
| arm_2R | 21134588..21135025 | 495..932 | 100 | | Plus |
BS20988.pep Sequence
Translation from 16 to 933
> BS20988.pep
MSTCLERFFCPNKPVCSSGRRATFYYPGGGSYSGYWLCNKHQGWGVKKTA
KRTCQYFYGKKHPEGQLIYEGDWVMNKRQGVGSMLRKRGTEVQLIYSGRW
YDDMKCGEGKQFYSDGCVYFGKWIKNRRHGLGIQWYNDGNIYAGEWETDF
RHGLGVMFYANGNRYEGHFARGYKNGEGVFYHMHTGQIQKGMWENDNLKT
SVVQDEPKIRCNAVITSYPIPRNYLKYPNEIMRDLFQRHKDFSNKPHRRF
NDRVSLAFIHHHRQYASCEERFASPTIVDLYPRAEFGCTCDCENVARNET
NISQI*
BS20988.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:04:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30429-PA | 305 | CG30429-PA | 1..305 | 1..305 | 1737 | 100 | Plus |
| CG14490-PA | 197 | CG14490-PA | 9..181 | 17..203 | 412 | 45 | Plus |
| CG5458-PA | 344 | CG5458-PA | 36..160 | 77..200 | 183 | 32.1 | Plus |
| CG5458-PA | 344 | CG5458-PA | 51..140 | 69..162 | 174 | 36.2 | Plus |
| CG5458-PA | 344 | CG5458-PA | 21..124 | 89..193 | 156 | 31.4 | Plus |
