Clone BS20991 Report

Search the DGRC for BS20991

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:209
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG15888-RB
Protein status:BS20991.pep: full length peptide match
Sequenced Size:992

Clone Sequence Records

BS20991.complete Sequence

992 bp assembled on 2011-01-28

GenBank Submission: KX803958

> BS20991.complete
GAAGTTATCAGTCGACATGCGAGCTAACTCGACGAGATCCTTATCCTGGC
ACATCCTGCTCGGACTTTGCCTATGTCTCCTGCAGAACCTCCACCCATCA
CTTGGCCAAGATGCAGTGCATCCTAGCGAAGACTTGAACCCAAGCACTGG
TCGTAGTCAGTCGGCGAATAGTGTATCATACTTTAAGGCGTCCATTCCAA
TGAGAATCTACGAGTGTCTGCGGGAGTTCACCATGCTACACTGCACGAAA
TTGTACGTTCTGCAGAAAATGGAGGAGCGCCGCCAGATGCCAAACAGTGG
AAATCTCACCCGCGACTTTGTGGATCAGTTCTTCGGGGACGAGACACAGA
TGGGCAGCCTGGTGGGCAAGAAGTACCACAAAATGTCCGAAAAGGAGCTC
AACCAGCGGCTGGTTGTTAATTTTCAGCGATTCTTTAAGCATCGTGATCT
CAAGATGCATATCCTGCCCGGAATGCTGGTGAAGATTGTGCCCAGCAAGG
ACAACAAACTGAAGTTCTCGATCAAGAAGGCACCCAAATCCCGGATGGGT
CGTTCCCGAAGACGTGAGACCGAAGAAATGGACCTGCCCCTTATTAATAT
TCCGTCCATCGGTGGGGGTGGTGCCAATAGTGGAAGTGTGGAGACCTACG
AACCGGAAGCGGAAGGAGATTCCAAGCAGCAGGGGCTATTGGGGGGCGGA
GGAGGCGTGGCCGGTGGCGAGGGGGGCGGCGGAGGCATTCTGGGCAAGCG
CAAGAAAAAGAACTCGTACAAGGTGACCATGATGCAGGTGGCGGTGCCCA
TGCTGATCTTCCCCGTCGTCCTGCTTGGCAGTCTCCTGCCCTTCATCCTG
CCCGCCCTTAAGATGGCCACCATCCTGTCGCTGGTGATGAACAATGGCGC
CTTTATGGCAGCTTTACTGTATGCCGCCCGTACCCAGTTCAACACCCACG
AGGAGCAGCACATCAGCTACAGTTAGAAGCTTTCTAGACCAT

BS20991.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:31:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG15888-RB 960 CG15888-PB 1..960 17..976 4800 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:31:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG15888-RB 1100 CG15888-RB 39..998 17..976 4800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:31:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13285978..13286491 530..17 2570 100 Minus
3R 32079331 3R 13285048..13285494 976..530 2235 100 Minus
Blast to na_te.dros performed on 2014-11-26 22:31:47 has no hits.

BS20991.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:31:46 Download gff for BS20991.complete
Subject Subject Range Query Range Percent Splice Strand
CG15888-RB 39..998 17..976 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:01:03 Download gff for BS20991.complete
Subject Subject Range Query Range Percent Splice Strand
CG15888-RB 39..998 17..976 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:03:35 Download gff for BS20991.complete
Subject Subject Range Query Range Percent Splice Strand
CG15888-RB 39..998 17..976 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:03:35 Download gff for BS20991.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13285048..13285493 531..976 100 <- Minus
3R 13285978..13286491 17..530 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:01:03 Download gff for BS20991.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9110770..9111215 531..976 100 <- Minus
arm_3R 9111700..9112213 17..530 100   Minus

BS20991.pep Sequence

Translation from 16 to 975

> BS20991.pep
MRANSTRSLSWHILLGLCLCLLQNLHPSLGQDAVHPSEDLNPSTGRSQSA
NSVSYFKASIPMRIYECLREFTMLHCTKLYVLQKMEERRQMPNSGNLTRD
FVDQFFGDETQMGSLVGKKYHKMSEKELNQRLVVNFQRFFKHRDLKMHIL
PGMLVKIVPSKDNKLKFSIKKAPKSRMGRSRRRETEEMDLPLINIPSIGG
GGANSGSVETYEPEAEGDSKQQGLLGGGGGVAGGEGGGGGILGKRKKKNS
YKVTMMQVAVPMLIFPVVLLGSLLPFILPALKMATILSLVMNNGAFMAAL
LYAARTQFNTHEEQHISYS*

BS20991.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:04:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG15888-PB 319 CG15888-PB 1..319 1..319 1646 100 Plus