BS20991.complete Sequence
992 bp assembled on 2011-01-28
GenBank Submission: KX803958
> BS20991.complete
GAAGTTATCAGTCGACATGCGAGCTAACTCGACGAGATCCTTATCCTGGC
ACATCCTGCTCGGACTTTGCCTATGTCTCCTGCAGAACCTCCACCCATCA
CTTGGCCAAGATGCAGTGCATCCTAGCGAAGACTTGAACCCAAGCACTGG
TCGTAGTCAGTCGGCGAATAGTGTATCATACTTTAAGGCGTCCATTCCAA
TGAGAATCTACGAGTGTCTGCGGGAGTTCACCATGCTACACTGCACGAAA
TTGTACGTTCTGCAGAAAATGGAGGAGCGCCGCCAGATGCCAAACAGTGG
AAATCTCACCCGCGACTTTGTGGATCAGTTCTTCGGGGACGAGACACAGA
TGGGCAGCCTGGTGGGCAAGAAGTACCACAAAATGTCCGAAAAGGAGCTC
AACCAGCGGCTGGTTGTTAATTTTCAGCGATTCTTTAAGCATCGTGATCT
CAAGATGCATATCCTGCCCGGAATGCTGGTGAAGATTGTGCCCAGCAAGG
ACAACAAACTGAAGTTCTCGATCAAGAAGGCACCCAAATCCCGGATGGGT
CGTTCCCGAAGACGTGAGACCGAAGAAATGGACCTGCCCCTTATTAATAT
TCCGTCCATCGGTGGGGGTGGTGCCAATAGTGGAAGTGTGGAGACCTACG
AACCGGAAGCGGAAGGAGATTCCAAGCAGCAGGGGCTATTGGGGGGCGGA
GGAGGCGTGGCCGGTGGCGAGGGGGGCGGCGGAGGCATTCTGGGCAAGCG
CAAGAAAAAGAACTCGTACAAGGTGACCATGATGCAGGTGGCGGTGCCCA
TGCTGATCTTCCCCGTCGTCCTGCTTGGCAGTCTCCTGCCCTTCATCCTG
CCCGCCCTTAAGATGGCCACCATCCTGTCGCTGGTGATGAACAATGGCGC
CTTTATGGCAGCTTTACTGTATGCCGCCCGTACCCAGTTCAACACCCACG
AGGAGCAGCACATCAGCTACAGTTAGAAGCTTTCTAGACCAT
BS20991.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:31:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15888-RB | 960 | CG15888-PB | 1..960 | 17..976 | 4800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:31:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15888-RB | 1100 | CG15888-RB | 39..998 | 17..976 | 4800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:31:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13285978..13286491 | 530..17 | 2570 | 100 | Minus |
3R | 32079331 | 3R | 13285048..13285494 | 976..530 | 2235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:31:47 has no hits.
BS20991.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:31:46 Download gff for
BS20991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15888-RB | 39..998 | 17..976 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:01:03 Download gff for
BS20991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15888-RB | 39..998 | 17..976 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:03:35 Download gff for
BS20991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15888-RB | 39..998 | 17..976 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:03:35 Download gff for
BS20991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13285048..13285493 | 531..976 | 100 | <- | Minus |
3R | 13285978..13286491 | 17..530 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:01:03 Download gff for
BS20991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9110770..9111215 | 531..976 | 100 | <- | Minus |
arm_3R | 9111700..9112213 | 17..530 | 100 | | Minus |
BS20991.pep Sequence
Translation from 16 to 975
> BS20991.pep
MRANSTRSLSWHILLGLCLCLLQNLHPSLGQDAVHPSEDLNPSTGRSQSA
NSVSYFKASIPMRIYECLREFTMLHCTKLYVLQKMEERRQMPNSGNLTRD
FVDQFFGDETQMGSLVGKKYHKMSEKELNQRLVVNFQRFFKHRDLKMHIL
PGMLVKIVPSKDNKLKFSIKKAPKSRMGRSRRRETEEMDLPLINIPSIGG
GGANSGSVETYEPEAEGDSKQQGLLGGGGGVAGGEGGGGGILGKRKKKNS
YKVTMMQVAVPMLIFPVVLLGSLLPFILPALKMATILSLVMNNGAFMAAL
LYAARTQFNTHEEQHISYS*
BS20991.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:04:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15888-PB | 319 | CG15888-PB | 1..319 | 1..319 | 1646 | 100 | Plus |