BS20993.complete Sequence
899 bp assembled on 2011-01-28
GenBank Submission: KX801533
> BS20993.complete
GAAGTTATCAGTCGACATGGCCGATGAGGAGCTGCAAACCTACCGTCGCT
GCGTTGGCCTGCAGCTGGAGGAGCTGGAGCTGCTGAGCTCCATATACTGC
GCGCCCGGAGAGCTGCATATGCTCGATGCCGGCGTAGTGGCTGATTTCAA
TGAGTTTCTCAAGGATGATAAGACAAAACCCGCTACTAGCCTTCTATCCC
ATTTGGAGTATGTGGTCAAATTGACTCTACCAGGCAAACAGTGCGTGGAA
GTGCGAGTGGAACTGCCGCACCTATATCCGCTTTTGGAGCAGGCACGCGT
CAGTGTACACACTACGCTACTGGGAAAATCCAAGGAGCAGCGCTTAAAGA
ATGATTTGGAGCAGTATCATGGTGAAAGGCGGGAGGAGGACGCCGAGCCG
TACATCTTCCAGCTGCTGAGCTGGCTGCAGGACCGCATCGAGGATCTGTT
AAAACGACCAGCTTCCGAGTTTGAAGTGCAGCAGGTAGCATCATCAGACC
CGCAACAGCCACCAGCTACGGAACTTCAGAGAATTTGGATTTATTCGCAT
CACATCAAATCCAGTGCCAAGCGGCAGGAGCTGATTCGGCAGGCCCGACA
GTTGGAGCTCACAGGATTCAGTAGACCCGGTAAACCGGGCATCATATGCG
TGGAAGGTGATTCGGCAAATGTACAGGAATTCTGGCGCACCATCAAGGCC
CTGCGCTGGCAGAAGATCAGCGTGGTGCGGACGGAGCCTCGGCAGCGCAA
GCGGGGATTCGAGGACTTCAGCGAACAGCTTTTTAATGCCGAAGAAGGCG
TCATGAACATGGGCCAGTTCATTCGATTCCTCGAAGCCCACGGATTTGGC
TACATGAAGTCGGAATTGTTTGGTTTAGCCTGAAAGCTTTCTAGACCAT
BS20993.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:31:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30338-RA | 867 | CG30338-PA | 1..867 | 17..883 | 4335 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:31:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30338-RA | 1039 | CG30338-RA | 117..984 | 16..883 | 4340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:31:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9598583..9599450 | 16..883 | 4340 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:31:50 has no hits.
BS20993.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:31:46 Download gff for
BS20993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30338-RA | 116..981 | 17..882 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:01:05 Download gff for
BS20993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30338-RA | 118..983 | 17..882 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:03:37 Download gff for
BS20993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30338-RA | 118..983 | 17..882 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:03:37 Download gff for
BS20993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9598584..9599449 | 17..882 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:01:05 Download gff for
BS20993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5486089..5486954 | 17..882 | 100 | | Plus |
BS20993.pep Sequence
Translation from 16 to 882
> BS20993.pep
MADEELQTYRRCVGLQLEELELLSSIYCAPGELHMLDAGVVADFNEFLKD
DKTKPATSLLSHLEYVVKLTLPGKQCVEVRVELPHLYPLLEQARVSVHTT
LLGKSKEQRLKNDLEQYHGERREEDAEPYIFQLLSWLQDRIEDLLKRPAS
EFEVQQVASSDPQQPPATELQRIWIYSHHIKSSAKRQELIRQARQLELTG
FSRPGKPGIICVEGDSANVQEFWRTIKALRWQKISVVRTEPRQRKRGFED
FSEQLFNAEEGVMNMGQFIRFLEAHGFGYMKSELFGLA*
BS20993.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:04:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30338-PA | 288 | CG30338-PA | 1..288 | 1..288 | 1492 | 100 | Plus |