BS20995.complete Sequence
872 bp assembled on 2011-01-18
GenBank Submission: KX803845
> BS20995.complete
GAAGTTATCAGTCGACATGGCCCTGGAAAGTATTTGTGGTATGGATAAGC
TGCCATTTATGAAGAGCTTTGGATATCGCACCTCGAAGCAGACAATTGAA
GAAATCAGAGTCGCATCGAGTAACATGGATAATCCCCTCGCCATAATGGC
TCCGCCATATGAAAATCCACGGGAAAGTGTGAAAAAACTGAATGCGCTAA
GTGAAGTGCAGATAGATTTTGACCACGGAACCACCACGGTGGGTTTTGTT
TACCAAGGTGGCATCATTTTGTGTGTGGATTCCAGAGCCACGTCGGGAAA
GTTAATTGGATCTCAGAGCATACATAAGGTCGTACAGGTCAACCAGTACA
TAATGGGTACCACTGCAGGTGGTGCAGCGGATTGCACATACTGGGATCGA
GCTTTGACCAGGGAGTGCCGACTGCACGAGCTCCGCTATAAGGAGCGACT
TCCAGTCCAATCTGCTGCCAAATATATCTCCAACGTGGCTGCGGAATACA
AGGGAATGGGTCTCTGCATGGGAATGATGCTGGCCGGTTGGTCGCCCGAA
GGACCCAGTTTGGTATACGTGGACTCCAACGGCCTGCGGATCCATGGAAA
GCTTTTCGCCGTGGGCAGTGGAGCCCCCAATGCCCTGGGAATTTTGGACT
CTGACTACCGGTTGGATCTCAGTGATAACGAGGCCTACGACCTGGCCTTC
CTTGCAGTATATCATGCTACCATGACAGATATCTTTTCAGGCGGTGTGGT
GAGACTATATCACATGGATCAAGGAAACTGGAGGAATGTGGCCAATAAAG
ACTGCCAGGAACTGCATGAACAGTACTCAGGTGTGGGAAATCAACAAACT
CCCTAAAAGCTTTCTAGACCAT
BS20995.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:17:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta5R2-RB | 840 | CG31742-PB | 1..840 | 17..856 | 4200 | 100 | Plus |
| Prosbeta5R2-RA | 840 | CG31742-PA | 1..840 | 17..856 | 4200 | 100 | Plus |
| Prosbeta5-RA | 849 | CG12323-PA | 484..529 | 494..539 | 185 | 93.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta5R2-RB | 1534 | CG31742-RB | 80..921 | 15..856 | 4210 | 100 | Plus |
| Prosbeta5R2-RA | 1082 | CG31742-RA | 80..921 | 15..856 | 4210 | 100 | Plus |
| Prosbeta5-RA | 1139 | CG12323-RA | 579..624 | 494..539 | 185 | 93.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17990497..17991338 | 15..856 | 4210 | 100 | Plus |
| 2R | 25286936 | 2R | 10820618..10820663 | 494..539 | 185 | 93.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:17:03 has no hits.
BS20995.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:47 Download gff for
BS20995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31742-RA | 82..919 | 17..854 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:36 Download gff for
BS20995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta5R2-RA | 82..919 | 17..854 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:30 Download gff for
BS20995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta5R2-RA | 82..919 | 17..854 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:30 Download gff for
BS20995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17990499..17991336 | 17..854 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:36 Download gff for
BS20995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17990499..17991336 | 17..854 | 100 | | Plus |
BS20995.pep Sequence
Translation from 16 to 855
> BS20995.pep
MALESICGMDKLPFMKSFGYRTSKQTIEEIRVASSNMDNPLAIMAPPYEN
PRESVKKLNALSEVQIDFDHGTTTVGFVYQGGIILCVDSRATSGKLIGSQ
SIHKVVQVNQYIMGTTAGGAADCTYWDRALTRECRLHELRYKERLPVQSA
AKYISNVAAEYKGMGLCMGMMLAGWSPEGPSLVYVDSNGLRIHGKLFAVG
SGAPNALGILDSDYRLDLSDNEAYDLAFLAVYHATMTDIFSGGVVRLYHM
DQGNWRNVANKDCQELHEQYSGVGNQQTP*
BS20995.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta5R2-PB | 279 | CG31742-PB | 1..279 | 1..279 | 1467 | 100 | Plus |
| Prosbeta5R2-PA | 279 | CG31742-PA | 1..279 | 1..279 | 1467 | 100 | Plus |
| Prosbeta5R1-PA | 315 | CG9868-PA | 1..274 | 1..274 | 924 | 58.8 | Plus |
| Prosbeta5-PA | 282 | CG12323-PA | 1..279 | 1..277 | 775 | 51.8 | Plus |
| Prosbeta5-PB | 282 | CG12323-PB | 1..279 | 1..277 | 775 | 51.8 | Plus |
