BS21005.complete Sequence
701 bp assembled on 2011-01-18
GenBank Submission: KX803224
> BS21005.complete
GAAGTTATCAGTCGACATGAGCGATGACAAAACAAAACCAACCTCAGTGC
TCCAGCATATAGAATCGGCGCTATATGTGATCAACCAGCTGTGCATAGGA
TTCGTCACCATTTGGATCAGCTGGACCTGCTTGCGCCAGGACCTCTCGGG
CATTCGCCTGCATGCCTGGCTGGTTACCTTCGGTTTTGTGTTCCTGATGG
CCGAGGGAATGATGTGCTTCTACGACGGCAGTTGGCTAACTGTGCGTTAC
TCCCGGAATTACAAGACTGCCTTTCACGTGGTCCTTCAGATCCTTGGGGG
AGGCATGGGCGTGGCCGGCTGTTTGATTCAACTAATACGTGACGATTGGT
CAATCAGCGTCACGTTACATGCCCGCCTGGGTTTCGCCGCCTTCGTCCTG
TGTCTGATCTCATTGCTGAGTGGACTGGTCGCCTTCCTGGCGAGATGCCT
GAGCAGGACCATCTCACCCTTGGTCAACAAGACCTTCCATGTGGTCCTCA
GCTTCACCGCCTTCGTGATCGCCATGATGGCGCAGTTTTACGGATACACA
CAGACTGGAATTTTCAGGGGACAAGGACAGGATTTCGTTGTCCTCATGCA
GGTCGTCACTATGGTCCTAATGGTCCTAACCAGCATTGGCGCCATTAAGT
CGCTCTACCAGAAGATTGGTAGCCTGGCCAGTTAGAAGCTTTCTAGACCA
T
BS21005.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:17:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13078-RA | 669 | CG13078-PA | 1..669 | 17..685 | 3345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13078-RA | 910 | CG13078-RA | 90..758 | 17..685 | 3345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19564338..19565006 | 17..685 | 3345 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:17:16 has no hits.
BS21005.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:49 Download gff for
BS21005.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13078-RA | 90..758 | 17..685 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:41 Download gff for
BS21005.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13078-RA | 90..758 | 17..685 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:35 Download gff for
BS21005.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13078-RA | 90..758 | 17..685 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:35 Download gff for
BS21005.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19564338..19565006 | 17..685 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:41 Download gff for
BS21005.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19564338..19565006 | 17..685 | 100 | | Plus |
BS21005.pep Sequence
Translation from 16 to 684
> BS21005.pep
MSDDKTKPTSVLQHIESALYVINQLCIGFVTIWISWTCLRQDLSGIRLHA
WLVTFGFVFLMAEGMMCFYDGSWLTVRYSRNYKTAFHVVLQILGGGMGVA
GCLIQLIRDDWSISVTLHARLGFAAFVLCLISLLSGLVAFLARCLSRTIS
PLVNKTFHVVLSFTAFVIAMMAQFYGYTQTGIFRGQGQDFVVLMQVVTMV
LMVLTSIGAIKSLYQKIGSLAS*
BS21005.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13078-PA | 222 | CG13078-PA | 1..222 | 1..222 | 1139 | 100 | Plus |
| CG13077-PB | 226 | CG13077-PB | 15..223 | 12..221 | 521 | 50.2 | Plus |
| CG13077-PA | 269 | CG13077-PA | 58..266 | 12..221 | 521 | 50.2 | Plus |
| CG10165-PD | 228 | CG10165-PD | 1..216 | 1..217 | 198 | 28.4 | Plus |
| CG10165-PC | 228 | CG10165-PC | 1..216 | 1..217 | 198 | 28.4 | Plus |
