BS21007.complete Sequence
788 bp assembled on 2011-01-18
GenBank Submission: KX804470
> BS21007.complete
GAAGTTATCAGTCGACATGCAGTACTTCGTGATGTCGTACTACTTTATGG
AGGTTTTGTATTCAGTGGTCAACACACCACTTGTGGGCAGGGAAAGAGCG
ATTGTGATGGACGTGAACGAGTGCTTCGGTCACTTCTACACATGCTTTGA
TGTCCTGCTGACCATCGGCGCCATCTTTCTCATTCTCGGCACGCGAAAGG
AGGCGAGCGGAGTGACTCTGCTGCTAATCGGAAGAGTTATCCACCGGCTG
TTCTTCTCGATATGGACCATGTTCTTTTATTTCCTCTTCAACGACAGCTT
GGATGTGGGCTCCCTGCTGCTGCTAATGGCGGCCAAAATCAATTTGAGGG
ATCAGATGGACTGGTTCCAGTCGAAATATCATATTTTACTGCTGGGAGGA
AGACTCTGTCTGTCCAGTTTGTACATCATTTGGATAGACGAGGGCTTGGA
GACCCTTTTCAGCATCGTTTCATTTGGTCTTTTGGTTTTCATTTGGCTTG
GCTTTCATTGCAAACTGTTTGCCTATCTGACGGTGATTGCCCTACTATAT
CACGATGTGTTTAGCAATCATTGGAGCATGTTGTGGGGCTGGAACGATAC
TCTGCTGTCGATACAATACTTCTCCCTGCTGTTCTGCAAAATTGGCGGAT
TCCTGATGCTCTCGGAGCTAGGTGGAGGCAGGTGGTCGGTGGATGGATAC
CGGAAGAGAAGTGGCGAGAAATGGGAGAAAAAAGGCAACTACCGGATCAT
TAAGACACAGACGTCGGCCTAGAAGCTTTCTAGACCAT
BS21007.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:17:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14070-RB | 756 | CG14070-PB | 1..756 | 17..772 | 3780 | 100 | Plus |
| CG14070-RA | 756 | CG14070-PA | 1..756 | 17..772 | 3780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14070-RB | 1229 | CG14070-RB | 91..846 | 17..772 | 3780 | 100 | Plus |
| CG14070-RA | 1082 | CG14070-RA | 91..846 | 17..772 | 3780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10901261..10901695 | 451..17 | 2175 | 100 | Minus |
| 2L | 23513712 | 2L | 10900884..10901206 | 772..450 | 1615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:17:21 has no hits.
BS21007.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:50 Download gff for
BS21007.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14070-RA | 71..826 | 17..772 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:44 Download gff for
BS21007.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14070-RA | 91..846 | 17..772 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:36 Download gff for
BS21007.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14070-RA | 91..846 | 17..772 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:36 Download gff for
BS21007.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10900884..10901204 | 452..772 | 100 | <- | Minus |
| 2L | 10901261..10901695 | 17..451 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:44 Download gff for
BS21007.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10900884..10901204 | 452..772 | 100 | <- | Minus |
| arm_2L | 10901261..10901695 | 17..451 | 100 | | Minus |
BS21007.pep Sequence
Translation from 16 to 771
> BS21007.pep
MQYFVMSYYFMEVLYSVVNTPLVGRERAIVMDVNECFGHFYTCFDVLLTI
GAIFLILGTRKEASGVTLLLIGRVIHRLFFSIWTMFFYFLFNDSLDVGSL
LLLMAAKINLRDQMDWFQSKYHILLLGGRLCLSSLYIIWIDEGLETLFSI
VSFGLLVFIWLGFHCKLFAYLTVIALLYHDVFSNHWSMLWGWNDTLLSIQ
YFSLLFCKIGGFLMLSELGGGRWSVDGYRKRSGEKWEKKGNYRIIKTQTS
A*
BS21007.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14070-PB | 251 | CG14070-PB | 1..251 | 1..251 | 1333 | 100 | Plus |
| CG14070-PA | 251 | CG14070-PA | 1..251 | 1..251 | 1333 | 100 | Plus |
