BS21018.complete Sequence
779 bp assembled on 2011-01-18
GenBank Submission: KX802819
> BS21018.complete
GAAGTTATCAGTCGACATGTTTGTGCAGTGGATTTTCCTGGCCTTCAGCG
TCACCGTGGTTTCCTCTAATTGGATTCCGGAACGAATCGTGGGAGGCGAC
TTGATAACCATTCTATCAGTTCCCTGGCAGGCTTCCATTCTTAGGCTTGG
ACGGTTTCACTGCGGTGCAGCCATCTACAGTGAAGACATCGTCATAACGG
CAGCCCACTGCCTCACCGACCGCGAGACCGAGTTCCTCTCAGTGAGAGTC
GGCTCATCGTTCACATTCTTCGGTGGTCAGGTGGTGAGGGTATCCAGTGT
TCTGTTACACGAGGAATACGACCAGTCCTGGTCCAACGACATAGCCGTGA
TGAGGCTTCAGTCCAAGCTCCGGCTGGGAAGTGCAGTCAGTGTCATTCCC
TTGGCCGATACTCCCCCGGCCAGTGGATCACCTGCCACCGTTTCTGGATG
GGGAGCCATTGGTTTTAAGAAGAATTACCCCATGTCCATACTGTCCGCTT
CGGTGGACATTGTGGACCAGGATCAGTGTCGTAGGTCGTACGGAAGAAAA
ATCACCAAGGACATGATCTGTGCGGCCGCTCCAGGAAAGGATGCCTGCTC
CGGCGATTCGGGAGGTCCTCTGGTCTCCGGTAACAAGCTCGTTGGGATCG
TGTCCTTTGGCAAGGAGTGCGCTCATCCCGAATATCCTGGAGTCTACGCT
AACGTGGCTGAGCTGAAGCCCTGGATTTTGGGCGCTATCGAAAGAATAAC
TAAATCTGAATAAAAGCTTTCTAGACCAT
BS21018.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:17:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17239-RB | 747 | CG17239-PB | 1..747 | 17..763 | 3735 | 100 | Plus |
| CG17239-RA | 747 | CG17239-PA | 1..747 | 17..763 | 3735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17239-RB | 832 | CG17239-RB | 5..759 | 10..764 | 3745 | 99.7 | Plus |
| CG17239-RA | 770 | CG17239-RA | 5..759 | 10..764 | 3745 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2251583..2252337 | 764..10 | 3745 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:17:26 has no hits.
BS21018.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:50 Download gff for
BS21018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17239-RA | 18..756 | 23..761 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:46 Download gff for
BS21018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17239-RA | 18..756 | 23..761 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:37 Download gff for
BS21018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17239-RA | 18..756 | 23..761 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:37 Download gff for
BS21018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2251586..2252324 | 23..761 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:46 Download gff for
BS21018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2251586..2252324 | 23..761 | 100 | | Minus |
BS21018.pep Sequence
Translation from 16 to 762
> BS21018.pep
MFVQWIFLAFSVTVVSSNWIPERIVGGDLITILSVPWQASILRLGRFHCG
AAIYSEDIVITAAHCLTDRETEFLSVRVGSSFTFFGGQVVRVSSVLLHEE
YDQSWSNDIAVMRLQSKLRLGSAVSVIPLADTPPASGSPATVSGWGAIGF
KKNYPMSILSASVDIVDQDQCRRSYGRKITKDMICAAAPGKDACSGDSGG
PLVSGNKLVGIVSFGKECAHPEYPGVYANVAELKPWILGAIERITKSE*
BS21018.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17239-PB | 248 | CG17239-PB | 1..248 | 1..248 | 1286 | 100 | Plus |
| CG17239-PA | 248 | CG17239-PA | 1..248 | 1..248 | 1286 | 100 | Plus |
| Ser12-PA | 245 | CG17240-PA | 1..245 | 1..244 | 630 | 54.1 | Plus |
| alphaTry-PA | 256 | CG18444-PA | 30..256 | 23..244 | 530 | 49.8 | Plus |
| gammaTry-PA | 253 | CG30028-PA | 2..250 | 3..238 | 529 | 44.2 | Plus |
