Clone BS21031 Report

Search the DGRC for BS21031

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:210
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG15535-RA
Protein status:BS21031.pep: gold
Sequenced Size:389

Clone Sequence Records

BS21031.complete Sequence

389 bp assembled on 2011-01-18

GenBank Submission: KX802536

> BS21031.complete
GAAGTTATCAGTCGACATGAAACCGAGATCGCAAAAAAGCCAAGGAAAAC
CCAATGGAAAACCAAACAGAGGCGCTGGTAAGGTGGGCCACAACCAGAAA
CCCTACTTCAAGAACAAGAACAACCAAAAGGCCAAAGGGGAAAAGCCAAA
TAAACCGGAAATTCGGAACATGAAACGCAAGGAAAAGGCTGCCCAGGAGG
CTGCGGAGCGGGAGAAAGTTAGAGCGGACCGGGATGCCCAGGTGAAGGCC
TATAAAAAGAAACGTTTGGAGAAAACCAAGGCCATCAGCAAAAGGACCCA
AAAGGGACAGCCCTTGATGAAGGATCGCATGCAGCTCTTACTGAAGCAGA
TCGAGGAGATGAAACGCAACTAAAAGCTTTCTAGACCAT

BS21031.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:17:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG15535-RB 357 CG15535-PB 1..357 17..373 1785 100 Plus
CG15535-RA 357 CG15535-PA 1..357 17..373 1785 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG15535-RB 828 CG15535-RB 98..454 17..373 1785 100 Plus
CG15535-RA 657 CG15535-RA 98..454 17..373 1785 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30423406..30423640 373..139 1175 100 Minus
3R 32079331 3R 30423709..30423832 140..17 620 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:17:30 has no hits.

BS21031.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:51 Download gff for BS21031.complete
Subject Subject Range Query Range Percent Splice Strand
CG15535-RA 12..366 17..371 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:48 Download gff for BS21031.complete
Subject Subject Range Query Range Percent Splice Strand
CG15535-RA 12..366 17..371 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:39 Download gff for BS21031.complete
Subject Subject Range Query Range Percent Splice Strand
CG15535-RA 98..452 17..371 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:39 Download gff for BS21031.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30423408..30423639 140..371 100 <- Minus
3R 30423710..30423832 17..139 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:48 Download gff for BS21031.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26249130..26249361 140..371 100 <- Minus
arm_3R 26249432..26249554 17..139 100   Minus

BS21031.pep Sequence

Translation from 16 to 372

> BS21031.pep
MKPRSQKSQGKPNGKPNRGAGKVGHNQKPYFKNKNNQKAKGEKPNKPEIR
NMKRKEKAAQEAAEREKVRADRDAQVKAYKKKRLEKTKAISKRTQKGQPL
MKDRMQLLLKQIEEMKRN*

BS21031.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG15535-PB 118 CG15535-PB 1..118 1..118 607 100 Plus
CG15535-PA 118 CG15535-PA 1..118 1..118 607 100 Plus