Clone BS21043 Report

Search the DGRC for BS21043

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:210
Well:43
Vector:pDNR-Dual
Associated Gene/TranscriptCG30383-RA
Protein status:BS21043.pep: full length peptide match
Sequenced Size:833

Clone Sequence Records

BS21043.complete Sequence

833 bp assembled on 2011-01-18

GenBank Submission: KX802413

> BS21043.complete
GAAGTTATCAGTCGACATGAAAATGGACGAAACTGTGGACGAAGCGGAAT
TTAATGCCAATATCGGCCGTATTGCTCGATCTACGCTTTTGCACGATGCT
GAACAATCGATCCACAGGGAGTTGATCGACTACGCTGTTGCGTCGTGCCG
TCTGTTTTACATCCAGGATGCTTCAGCCTGGAAGGAGTGGAACACCAGGA
ACGAGGCTTTCAGGGATCTCACTGCCAAGGAAGTGTGCCATTTATTCCTA
ACCGAAGTTCTGCCCCAACTGGACACCTATCAGCTTTCGGAGATGGCCCA
AAAACGCCTTAAGCTTCTGGATCTGCATCCATTCTTCAGGCGCGTTGCCC
AAGGCTACCAGTACACTCCGGATTGTGACCTTGCAGCTCGATTTGTAGTC
CAGCGCCAGAAACATTTTATCCAACCTGAAGATATCAAGAAGATTAAGAA
AGGCGATTCCCTGAAAAGATGCCAAACCGTGCTCATGGAAAGCGATGAAA
TGGAGCAGAAAACCTGCGTTGGGTATCGAAGCAAAGTCTCCATGGAGTCC
GCCGTTCTGTTCTCGGTACTGTTGTCCACCAACCATGAGCTTTCTATTGG
AAAGATGCTCGATATGAGTGAGATTCACGAAAGAATGCGGCGCGCCAAAC
AGTCATTCGAGGATACTGCTAGAGTTACTCCGTTCCGAACGAACATTGAT
GACCTAATCTCCGATTTGGATGTCTGTGCTAAGGTCAAATCCAAACTTTG
TCGAGTAATAAGTGATTGTAAAAAGTACTAGAAGCTTTCTAGACCTATTC
GTTGGGGCGGCTGCTGAAAAGGGGGGAGTGGGT

BS21043.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:17:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG30383-RA 765 CG30383-PA 1..765 17..781 3825 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG30383-RA 966 CG30383-RA 19..785 17..783 3835 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:33
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7824692..7825123 448..17 2160 100 Minus
2R 25286936 2R 7824124..7824460 783..447 1685 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:17:34 has no hits.

BS21043.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:51 Download gff for BS21043.complete
Subject Subject Range Query Range Percent Splice Strand
CG30383-RA 19..791 17..788 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:51 Download gff for BS21043.complete
Subject Subject Range Query Range Percent Splice Strand
CG30383-RA 19..791 17..788 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:41 Download gff for BS21043.complete
Subject Subject Range Query Range Percent Splice Strand
CG30383-RA 19..791 17..788 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:41 Download gff for BS21043.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7824118..7824458 449..788 99 <- Minus
2R 7824692..7825123 17..448 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:51 Download gff for BS21043.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3711623..3711963 449..788 99 <- Minus
arm_2R 3712197..3712628 17..448 100   Minus

BS21043.pep Sequence

Translation from 16 to 780

> BS21043.pep
MKMDETVDEAEFNANIGRIARSTLLHDAEQSIHRELIDYAVASCRLFYIQ
DASAWKEWNTRNEAFRDLTAKEVCHLFLTEVLPQLDTYQLSEMAQKRLKL
LDLHPFFRRVAQGYQYTPDCDLAARFVVQRQKHFIQPEDIKKIKKGDSLK
RCQTVLMESDEMEQKTCVGYRSKVSMESAVLFSVLLSTNHELSIGKMLDM
SEIHERMRRAKQSFEDTARVTPFRTNIDDLISDLDVCAKVKSKLCRVISD
CKKY*

BS21043.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG30383-PA 254 CG30383-PA 1..254 1..254 1311 100 Plus