BS21052.complete Sequence
1001 bp assembled on 2011-01-18
GenBank Submission: KX805794
> BS21052.complete
GAAGTTATCAGTCGACATGAAATCAGAAACTGAGACTCTGCTCTTGCAAA
ATGCTGTTCCTATAATAGATTTAGAAAATACCATCGAGGACGTGGCGACA
AATCTGAGAGAGGCTTTATCTGAAAAGGGGTATGCTCTGCTAATAAACCA
CGGTATTTCAAATGAGAAGATTAAAAAAGCTTGGAAGTATTTCGATGGCT
TTGTCGACCTGACCGATGAAGTTAAATTGGCATTTGAGAGAAGCAAAGCT
CCAGATGGCGAAAATCATGGTTACGTGAGTCCAGGAATGGAGCGATTTGA
TGGCAGGACACCGGAGCTGCGCCATGCTTACAATATATGCAAGCTGCAGG
ATAAATTTCTGCCTGAACAGCAGCTACCAGGATTTAGCAGGCACATTAAC
TCCTTAGTCGATGACTTCAATGAATTGGGTAGGTTTATTCTTAAGGCTCT
GGCAATTTCATTGGATGCTCCACCTTCGTTCTTCACGGATAAACATTCGT
TTATGCTGTCCGACGATCGCTTTAATCTGACCACCCTACGGATGCTGTTT
TACCCGCCCGTGGAAGATCAGGATCATGGAAGAAGCTTCATACGATGTGG
AGCCCATGCCGACTACTGCACCTTTACTCTGTTGGCTCAGGATTCGGAGG
GTGGATTGGAGGTCAAACTGCGGGGCAGTGACAAGTGGGAGCGAGTGGGT
CATCTGCCAGGAGCACTCTTCATAAACTGCGGTGAAACCATGGCTATCTG
GACAGATCAGTTCTACCACGCTTTGCAACATAGAGTAGTGATTCCCGATC
AGGTTGATATTCGCCATCGAGGCCGGCACTCCATTGCCTATTTCTGTCAT
CCTGATAACTCTGCACTGATTAATCCAAAAGATTTAAATATTACAACTAA
GCAGACGACAAGTGACGTAATACAAAACGCATATGATATAACTATGGCTC
TGGCAAAAGGCGCATTTGCACATCATTATTCTTAGAAGCTTTCTAGACCA
T
BS21052.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:17:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33093-RA | 969 | CG33093-PA | 1..969 | 17..985 | 4845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33093-RA | 1055 | CG33093-RA | 40..1008 | 17..985 | 4845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22531071..22531678 | 775..168 | 3040 | 100 | Minus |
| 3R | 32079331 | 3R | 22531731..22531883 | 169..17 | 765 | 100 | Minus |
| 3R | 32079331 | 3R | 22530871..22531014 | 918..775 | 720 | 100 | Minus |
| 3R | 32079331 | 3R | 22530741..22530807 | 985..919 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:17:44 has no hits.
BS21052.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:53 Download gff for
BS21052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33093-RA | 40..1008 | 17..985 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:56 Download gff for
BS21052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33093-RA | 40..1008 | 17..985 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:45 Download gff for
BS21052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33093-RA | 40..1008 | 17..985 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:45 Download gff for
BS21052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22530741..22530807 | 919..985 | 100 | <- | Minus |
| 3R | 22530871..22531013 | 776..918 | 100 | <- | Minus |
| 3R | 22531071..22531676 | 170..775 | 100 | <- | Minus |
| 3R | 22531731..22531883 | 17..169 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:56 Download gff for
BS21052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18356463..18356529 | 919..985 | 100 | <- | Minus |
| arm_3R | 18356593..18356735 | 776..918 | 100 | <- | Minus |
| arm_3R | 18356793..18357398 | 170..775 | 100 | <- | Minus |
| arm_3R | 18357453..18357605 | 17..169 | 100 | | Minus |
BS21052.pep Sequence
Translation from 16 to 984
> BS21052.pep
MKSETETLLLQNAVPIIDLENTIEDVATNLREALSEKGYALLINHGISNE
KIKKAWKYFDGFVDLTDEVKLAFERSKAPDGENHGYVSPGMERFDGRTPE
LRHAYNICKLQDKFLPEQQLPGFSRHINSLVDDFNELGRFILKALAISLD
APPSFFTDKHSFMLSDDRFNLTTLRMLFYPPVEDQDHGRSFIRCGAHADY
CTFTLLAQDSEGGLEVKLRGSDKWERVGHLPGALFINCGETMAIWTDQFY
HALQHRVVIPDQVDIRHRGRHSIAYFCHPDNSALINPKDLNITTKQTTSD
VIQNAYDITMALAKGAFAHHYS*
BS21052.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33093-PA | 322 | CG33093-PA | 1..322 | 1..322 | 1712 | 100 | Plus |
| CG33099-PA | 331 | CG33099-PA | 8..317 | 2..308 | 908 | 55.9 | Plus |
| CG5346-PA | 403 | CG5346-PA | 12..356 | 6..290 | 800 | 47.4 | Plus |
