Clone BS21055 Report

Search the DGRC for BS21055

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:210
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG32061-RA
Protein status:BS21055.pep: full length peptide match
Sequenced Size:677

Clone Sequence Records

BS21055.complete Sequence

677 bp assembled on 2011-01-18

GenBank Submission: KX800509

> BS21055.complete
GAAGTTATCAGTCGACATGTTCATACCCAAAATACGAGACATTGGTTACT
TTGCGCTGCTGACATCCCTGCACTTGGGCTCAAATCTTCAGCCGGTCATC
GAGGCGAATGCCAATCTAAAAACGGTCTATCCCTCCGTGAATCGTAATCT
AACGCTTCAATTGGGCTATAAATACAATCACTGGATGCTGGTTAAGGCCA
TAATGTATTCACTACTATCTATGATCGGAGTTTGGTACTCACGACACTTG
CAAAGTGGCAAAAGTGAGGTATCGATGGAAAAGAAAGGAATCCTTAAAAC
TACGACAACAGCTGCAGAGCAAGTGAAAAACAATTGGATCAAAAAACAGA
ATTCCGCATTGAAAAACGGAACCCTGCCGCGGAATATATTCCTGTTATTT
GCTTTGCCCTGGATATTGACCTTTGTGGCCAGCGGATTGATCAACTATAT
TCGATTTTACATGGTCATACAGCATTTTTGCATATCTAACTGGAGGGCGA
TTCAGCTTTATGGAGAACTGCAAGGCCTCTTTTGGCATCGTTCTACATCC
GTGACTTTAATACCCTATTGGTCGCAAATTATCGGCGGAGGAGTATCCTT
GGAGAAGGCATCTCATCTTTCTGGAAATTGTATTTCCATTGAAACACATC
TTTTGGACTGAAAGCTTTCTAGACCAT

BS21055.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:17:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG32061-RA 645 CG32061-PA 1..645 17..661 3225 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG32061-RA 820 CG32061-RA 85..731 16..662 3235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10463900..10464546 16..662 3235 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:17:49 has no hits.

BS21055.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:53 Download gff for BS21055.complete
Subject Subject Range Query Range Percent Splice Strand
CG32061-RA 91..729 22..660 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:58 Download gff for BS21055.complete
Subject Subject Range Query Range Percent Splice Strand
CG32061-RA 91..729 22..660 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:47 Download gff for BS21055.complete
Subject Subject Range Query Range Percent Splice Strand
CG32061-RA 91..729 22..660 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:47 Download gff for BS21055.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10463906..10464544 22..660 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:58 Download gff for BS21055.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10457006..10457644 22..660 100   Plus

BS21055.pep Sequence

Translation from 16 to 660

> BS21055.pep
MFIPKIRDIGYFALLTSLHLGSNLQPVIEANANLKTVYPSVNRNLTLQLG
YKYNHWMLVKAIMYSLLSMIGVWYSRHLQSGKSEVSMEKKGILKTTTTAA
EQVKNNWIKKQNSALKNGTLPRNIFLLFALPWILTFVASGLINYIRFYMV
IQHFCISNWRAIQLYGELQGLFWHRSTSVTLIPYWSQIIGGGVSLEKASH
LSGNCISIETHLLD*

BS21055.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG32061-PA 214 CG32061-PA 1..214 1..214 1121 100 Plus