Clone BS21070 Report

Search the DGRC for BS21070

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:210
Well:70
Vector:pDNR-Dual
Associated Gene/TranscriptCG11726-RA
Protein status:BS21070.pep: full length peptide match
Sequenced Size:908

Clone Sequence Records

BS21070.complete Sequence

908 bp assembled on 2011-01-18

GenBank Submission: KX806556

> BS21070.complete
GAAGTTATCAGTCGACATGGCAAAGATGTCCAAGTCATCGCGTAGCTTCA
AGCTGCCACCAGTCAGCTCCTCTTCCGTGTCCTCGGTCTCCGGCAGCGAA
TCCGGGCAAGGATTGGAAGACATGTTGCACGTGACAAAGGTGCGAACTTC
CCAGGTGGACAACGCAGAGCTTTTCATGTACGGCGACGGGCCCAAAAAAT
CGAATTCAGATCTGCAGAAAAAGGTCAGTACACCCGATCCGGAAGAGGAG
GTGTCAATGGAACCACCATTTGTGGCATTGGTCAGCAATTTGCCAATGGA
GTGCACTGAAGGCGAGTTGCGGAAAGTGTTCACCAGTTTTTCGATCCGTT
CTCTAACCATTCCGAAGAAGGGAAAGCGACCCAAGGGATTTGCGTATGTG
GAAATGGATTCCCGCGAGGATCTCGTTCGTCTGCTCAAAATGGATAAGCT
TAAGTGCCGTGGTCGTTGTCTTATGGCCAAAATAGGCCAATTGCCACCCG
AACCACCGACAAAGGCAGCTGGAGATGGCTTTTCATTATTTACTTGTTCA
GGCAGGCAATTTGATATAAACTCTAGCCATTATTCGGCCAGTGTCAGTGA
TCTCAGCACCATCGATTCGCCAATCTCTGCGAGGAACTCACCATTTCCTT
CGGAAAGTGAGTCGTCCTTTTTCGGCAGGGATAATCCTATAAAAAGAATT
CCTAGTAGCACTGAGGAAGTGGAACGCCGTATGCAAATTCGTCTTCAGAA
ACTAGCCGAATTCGAAAATTCTGAATCGGAGAGAATTAAGAGTGAATGCG
AGGATGATCCGGATGCCTTCATGTCCTGGAGCGATGCCCTAGACGAGATT
AGAAAATCTGAAACTGATTCCTCAAATCATACTGAATCCTAGAAGCTTTC
TAGACCAT

BS21070.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:17:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG11726-RA 876 CG11726-PA 1..876 17..892 4380 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG11726-RA 984 CG11726-RA 82..957 17..892 4380 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11394771..11395646 17..892 4380 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:17:54 has no hits.

BS21070.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:54 Download gff for BS21070.complete
Subject Subject Range Query Range Percent Splice Strand
CG11726-RA 82..957 17..892 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:00 Download gff for BS21070.complete
Subject Subject Range Query Range Percent Splice Strand
CG11726-RA 82..957 17..892 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:49 Download gff for BS21070.complete
Subject Subject Range Query Range Percent Splice Strand
CG11726-RA 82..957 17..892 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:49 Download gff for BS21070.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11394771..11395646 17..892 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:00 Download gff for BS21070.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11387871..11388746 17..892 100   Plus

BS21070.pep Sequence

Translation from 16 to 891

> BS21070.pep
MAKMSKSSRSFKLPPVSSSSVSSVSGSESGQGLEDMLHVTKVRTSQVDNA
ELFMYGDGPKKSNSDLQKKVSTPDPEEEVSMEPPFVALVSNLPMECTEGE
LRKVFTSFSIRSLTIPKKGKRPKGFAYVEMDSREDLVRLLKMDKLKCRGR
CLMAKIGQLPPEPPTKAAGDGFSLFTCSGRQFDINSSHYSASVSDLSTID
SPISARNSPFPSESESSFFGRDNPIKRIPSSTEEVERRMQIRLQKLAEFE
NSESERIKSECEDDPDAFMSWSDALDEIRKSETDSSNHTES*

BS21070.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG11726-PA 291 CG11726-PA 1..291 1..291 1484 100 Plus