BS21077.complete Sequence
809 bp assembled on 2011-01-18
GenBank Submission: KX800491
> BS21077.complete
GAAGTTATCAGTCGACATGCTTATTAAAGTTGCCAAGTTCCTGAGTATTG
TAGCCGTACTCCTTTCAGCAGTCGAAGGAGCTAAATATCTGGCAGAGAAA
CCCGACTTCCTAATCCCATGTATCGTGGGCGATCCCAACTTTAATGTCTG
TCTGACCAAAAACTTCCAGAGTTTCTTCCGTCAGTGGAAGGACGGAATTC
CCGGCTACAATGCCGTGGGATCCTTTGATCCTTTTTACATCAAGAGAGTG
AAATTTACCCAGGATGCCAGCAGGTCTATAGCTATCAATGCCGATCTGAA
GGAAGTCTATGTAGCAGGTGCTGGTCAAGCATTAGTCTTGGAATCCAGCT
GGGATCCAAATCACTATGTAGCCAGGACTTTGATTTCCGTGCCCAAGTTG
CGTTTCAATTTCGATTACAAAGTCAAAGGACACGTCTCAGCGCTGAATCT
CAATGGTCATGGCAAGGGATACTTCGAAGCTGAAAATGCTCTGTTATTGT
TGGAATTGGCTGTCAAACCGCTGGCCACCTCAGATGGTTATTTCGCTGAT
GTGCAAAGTGTAAAGGTAAATTTCCGCGAGATCAAGCAATTCCGCATCAA
GCTGGAAAATCTCTTTGGCGGCAACAAGGATCTGGAGGATACTGCACACA
TTTTGTTCAACGAAAACTGGCGCGACTTCTTTGAGGTACTGCGTCCGGCG
GTGGAGCAAACAGTTGGCGGAGTGCTTTTGGATCGGTTCAAGAAGACCTT
TGTCTATGTACCAGCTACCTATTTGATTAAAGACTTTCACTAAAAGCTTT
CTAGACCAT
BS21077.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:04:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14258-RA | 777 | CG14258-PA | 1..777 | 17..793 | 3885 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14258-RA | 901 | CG14258-RA | 37..818 | 17..798 | 3895 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27093825..27094141 | 482..798 | 1570 | 99.7 | Plus |
3R | 32079331 | 3R | 27093335..27093581 | 102..348 | 1235 | 100 | Plus |
3R | 32079331 | 3R | 27093633..27093769 | 346..482 | 685 | 100 | Plus |
3R | 32079331 | 3R | 27093179..27093263 | 17..101 | 425 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:04:27 has no hits.
BS21077.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:15 Download gff for
BS21077.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14258-RA | 37..811 | 17..791 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:10 Download gff for
BS21077.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14258-RA | 37..811 | 17..791 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:43 Download gff for
BS21077.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14258-RA | 37..811 | 17..791 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:43 Download gff for
BS21077.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27093335..27093581 | 102..348 | 100 | -> | Plus |
3R | 27093636..27093769 | 349..482 | 100 | -> | Plus |
3R | 27093179..27093263 | 17..101 | 100 | -> | Plus |
3R | 27093826..27094134 | 483..791 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:10 Download gff for
BS21077.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22919358..22919491 | 349..482 | 100 | -> | Plus |
arm_3R | 22919548..22919856 | 483..791 | 100 | | Plus |
arm_3R | 22918901..22918985 | 17..101 | 100 | -> | Plus |
arm_3R | 22919057..22919303 | 102..348 | 100 | -> | Plus |
BS21077.pep Sequence
Translation from 16 to 792
> BS21077.pep
MLIKVAKFLSIVAVLLSAVEGAKYLAEKPDFLIPCIVGDPNFNVCLTKNF
QSFFRQWKDGIPGYNAVGSFDPFYIKRVKFTQDASRSIAINADLKEVYVA
GAGQALVLESSWDPNHYVARTLISVPKLRFNFDYKVKGHVSALNLNGHGK
GYFEAENALLLLELAVKPLATSDGYFADVQSVKVNFREIKQFRIKLENLF
GGNKDLEDTAHILFNENWRDFFEVLRPAVEQTVGGVLLDRFKKTFVYVPA
TYLIKDFH*
BS21077.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:59:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14258-PA | 258 | CG14258-PA | 1..258 | 1..258 | 1339 | 100 | Plus |
CG14457-PB | 271 | CG14457-PB | 7..255 | 5..256 | 398 | 31.7 | Plus |
CG14457-PC | 270 | CG14457-PC | 7..254 | 5..256 | 381 | 30.6 | Plus |
CG17189-PA | 264 | CG17189-PA | 2..248 | 14..256 | 356 | 33.7 | Plus |
CG14259-PA | 289 | CG14259-PA | 23..271 | 9..256 | 344 | 32 | Plus |