BS21086.complete Sequence
866 bp assembled on 2011-01-18
GenBank Submission: KX804879
> BS21086.complete
GAAGTTATCAGTCGACATGTTGGCTCTCCGCTTGTTTGTACTGCTGCAGT
GCAGCCTGTTGGTTCTGGCTGGCGTTTGTTTAATACCACAGCCCGTTAAG
AGGCAGCGATCGCTTGAGGATGTTATAAAGAATCCCTGGAAGCTATCACC
CCGCCTGGATGGCCGTATTGTGGGCGGTCACCGCATCAACATCACCGATG
CACCACATCAGGTTTCGCTGCAGACTTCGTCCCATATTTGCGGCGGTTCT
ATTATATCCGAGGAGTGGATATTGACTGCCGCCCATTGCACATATGGTAA
AACGGCAGATCGCCTGAAAGTGCGACTCGGAACCAGCGAATTTGCTCGCA
GTGGCCAACTTCTGCGGGTGCAGAAGATCGTGCAGCACGCCCAGTTCAAC
TACACCAATGTGGACTACGATTTCTCGCTGCTTCAGCTAGCTCATCCCAT
CAAGTTTGACGAGACCAAAAAGGCGGTCAAGCTGCCCGAGTCTCAGATGA
AATACATGGACGGGGAAGCTTGCTTCGTGAGTGGTTGGGGCAACACCCAG
AACCTGCTGGAGTCCCGCGAGTGGCTGCGTCAGGTGGAGGTGCCTCTGGT
CAATCAGGAGCTTTGCAGCGAGAAGTACAAACAGTACGGCGGCGTCACCG
AGCGAATGATCTGTGCTGGATTTCTGGAAGGCGGAAAGGATGCGTGCCAA
GGCGATTCCGGCGGTCCGATGGTCAGTGAATCGGGCGAGCTGGTGGGCGT
GGTTAGCTGGGGCTACGGTTGCGCTAAGCCCGACTATCCGGGTGTCTACT
CAAGAGTAAGTTTCGCACGGGATTGGATCAAGGAGCACAGTGGTGTCTAG
AAGCTTTCTAGACCAT
BS21086.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:04:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31954-RA | 834 | CG31954-PA | 1..834 | 17..850 | 4170 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31954-RA | 978 | CG31954-RA | 30..865 | 16..851 | 4180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3509171..3509727 | 851..295 | 2785 | 100 | Minus |
| 2L | 23513712 | 2L | 3509795..3510073 | 294..16 | 1395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:04:47 has no hits.
BS21086.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:17 Download gff for
BS21086.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31954-RA | 16..844 | 22..850 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:18 Download gff for
BS21086.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31954-RA | 36..864 | 22..850 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:50 Download gff for
BS21086.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31954-RA | 36..864 | 22..850 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:50 Download gff for
BS21086.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3509172..3509727 | 295..850 | 100 | <- | Minus |
| 2L | 3509795..3510067 | 22..294 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:18 Download gff for
BS21086.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3509172..3509727 | 295..850 | 100 | <- | Minus |
| arm_2L | 3509795..3510067 | 22..294 | 100 | | Minus |
BS21086.pep Sequence
Translation from 16 to 849
> BS21086.pep
MLALRLFVLLQCSLLVLAGVCLIPQPVKRQRSLEDVIKNPWKLSPRLDGR
IVGGHRINITDAPHQVSLQTSSHICGGSIISEEWILTAAHCTYGKTADRL
KVRLGTSEFARSGQLLRVQKIVQHAQFNYTNVDYDFSLLQLAHPIKFDET
KKAVKLPESQMKYMDGEACFVSGWGNTQNLLESREWLRQVEVPLVNQELC
SEKYKQYGGVTERMICAGFLEGGKDACQGDSGGPMVSESGELVGVVSWGY
GCAKPDYPGVYSRVSFARDWIKEHSGV*
BS21086.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:59:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31954-PA | 277 | CG31954-PA | 1..277 | 1..277 | 1468 | 100 | Plus |
| Try29F-PD | 267 | CG9564-PD | 36..267 | 45..277 | 667 | 54.5 | Plus |
| Try29F-PC | 267 | CG9564-PC | 36..267 | 45..277 | 667 | 54.5 | Plus |
| CG13430-PB | 267 | CG13430-PB | 29..261 | 48..273 | 460 | 42.5 | Plus |
| CG13430-PA | 267 | CG13430-PA | 29..261 | 48..273 | 460 | 42.5 | Plus |
