BS21089.complete Sequence
862 bp assembled on 2011-01-18
GenBank Submission: KX802271
> BS21089.complete
GAAGTTATCAGTCGACATGAATTTAAAGTATAAGCGGCGCTACGAGAGCT
TAAAACGCTCCGTCAAGAGTTATCTACTGGAGAACGCCGCCCTCACGGAT
GAGATCTGTCGTCTGCAGGCCGAACTATCTGTGACCCGATCCCAAAGACT
TTACTTGATAGAGCGCCTCATGTTTCACGAGGGCTTGGAGAAATCCAACA
GTGGACGACCCAGTGTCTCGAATGGAAAAAACGACGCCGCTGAAACCACA
AAGAAATACAGTCCTGTAGTTTCGCATAAGAACCCCGTCGAAGATAAGCC
AAAAAATGTTACAATTGTACGGAAAAAGAAGCCCATGTTTCCGATGAACC
TAAATAATGTATTACTCCACTCACTGGGCGAGATTATATCAGTGAATCCC
AATTTTCACACTGAGAGCTGGATATATCCCGTGGGATATGTGGCCACACG
AATCTACGCCCATCCCAAGGATCCGCGCAAGAAGTGTGTGTTCACATGTA
AGATTTTAAATAACGCCGGGATTCCTCAGTTCCAAATAATACCCGACAAT
GATCTGGATGGAGTTTTCTTCGGAGAAAGCGCCAATATGTGTCACATGGA
GCTTCTTAACTCCATTCAGCGGTCTCCCTGCGTTAAAATTAAAATACCGT
TCGACGTACAGGGCGAGGTTTTCTTTGGCTTGTCAAACCAAAAAACACAA
TCGCTGCTTATGATGGATCCTGCCTTTCATCAGTGCACGAATTTCAAGGG
ATTCGCGGTGCAGAATGTTCAGTCCTTAAACAGCGCGTCTTTATCCTTTG
AGACGCTCCAGGGATTTCTCTCTTGAAAGCTTTCTAGACCATTCGTTTGG
CGCGCGAAAGGG
BS21089.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:04:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31111-RA | 810 | CG31111-PA | 1..810 | 17..826 | 4005 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31111-RA | 952 | CG31111-RA | 81..890 | 17..826 | 4005 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25055138..25055885 | 826..79 | 3695 | 99.6 | Minus |
| 3R | 32079331 | 3R | 25056034..25056097 | 80..17 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:04:51 has no hits.
BS21089.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:18 Download gff for
BS21089.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31111-RA | 81..894 | 17..829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:20 Download gff for
BS21089.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31111-RA | 81..894 | 17..829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:52 Download gff for
BS21089.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31111-RA | 81..894 | 17..829 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:52 Download gff for
BS21089.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25056035..25056097 | 17..79 | 100 | | Minus |
| 3R | 25055134..25055884 | 80..829 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:20 Download gff for
BS21089.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20880856..20881606 | 80..829 | 99 | <- | Minus |
| arm_3R | 20881757..20881819 | 17..79 | 100 | | Minus |
BS21089.pep Sequence
Translation from 16 to 825
> BS21089.pep
MNLKYKRRYESLKRSVKSYLLENAALTDEICRLQAELSVTRSQRLYLIER
LMFHEGLEKSNSGRPSVSNGKNDAAETTKKYSPVVSHKNPVEDKPKNVTI
VRKKKPMFPMNLNNVLLHSLGEIISVNPNFHTESWIYPVGYVATRIYAHP
KDPRKKCVFTCKILNNAGIPQFQIIPDNDLDGVFFGESANMCHMELLNSI
QRSPCVKIKIPFDVQGEVFFGLSNQKTQSLLMMDPAFHQCTNFKGFAVQN
VQSLNSASLSFETLQGFLS*
BS21089.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:59:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31111-PA | 269 | CG31111-PA | 1..269 | 1..269 | 1404 | 100 | Plus |
