BS21094.complete Sequence
1016 bp assembled on 2011-01-18
GenBank Submission: KX802959
> BS21094.complete
GAAGTTATCAGGCGACATGGAAATTGTTATAAGGTTTCTGCAAAGCATAG
CACCCGTCTTCTTGGCCCATGGGATTGTCGGCATTATCGCCTTCTGCGTG
AGGCTGTATATGCAGGGCGGAAAGTTTAGGAAGCAGACCGATGAGACGGG
AAAAGTGGCCATCGTTACTGGCGGAAATACGGGTCTTGGCAAGGAGACCG
TGATGGAGTTGGCCAGGAGAGGAGCCACCGTTTACATGGCATGCCGCAAC
AAAGAAAAGGTGGAGAGAGCGCGCAGGGAAATCGTAAAGGAGACCGGAAA
CTCCAATGTCTTCTCACGGGAGTGCGACTTGTCGTCCCTGGATTCCATTC
GAAAGTTTGCAGAGAACTTCAAGAAAGAGCAGAGGGTGCTGCACATCCTC
ATCAACAATGCTGGTGTGTTTTGGGAACCGCATAGATTGACGAAAGAGGG
ATTCGAAATGCACCTGGGTGTAAACCACATCGGACACTTCCTGCTAACCA
ACCTACTGCTCGGCGTGCTGGAGAGGTCGGCTCCTAGTCGGGTGGTGGTG
GTCGCCAGCAGGGCCCACGAACGGGGTCAGATTAAGGTGGATGACATCAA
CAGCTCTGATTTTTACGACGAGGGAGTAGCCTACTGCCAAAGTAAGCTGG
CCAACATACTCTTCACCCGCGAACTGGCCAAGCGGTTGGAGGGAACGGGC
GTGACGGTCAACGCCCTTAATCCTGGAATAGCAGACACGGAGATAGCCAG
GAACATGATCTTCTTCCAAACAAAGTTTGCTCAAACCATTTTGAGGCCGC
TCCTTTGGGCCGTGATGAAGACGCCTAAGAACGGGGCCCAGACCACCTTG
TATGCTGCCTTGGATCCTGATCTCGAAAGAGTGTCGGGTCAGTACTTCAG
CGATTGCGCTCTGGCTCCGGTAGCTCCCGCTGCCCTCGACGACCAGATGG
CCCAGTGGTTGTGGGCGCAGTCCGAGAAGTGGGCGAAAATTGCGCTGTAA
AAGCTTTCTAGACCAT
BS21094.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:04:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30495-RA | 984 | CG30495-PA | 1..984 | 17..1000 | 4920 | 100 | Plus |
| CG30495-RB | 996 | CG30495-PB | 1..996 | 17..1000 | 4765 | 98.8 | Plus |
| CG2065-RB | 903 | CG2065-PB | 1..137 | 110..246 | 250 | 78.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30495-RA | 1355 | CG30495-RA | 44..1028 | 17..1001 | 4925 | 100 | Plus |
| CG30495-RB | 1939 | CG30495-RB | 319..1315 | 17..1001 | 4770 | 98.8 | Plus |
| CG2065-RB | 1233 | CG2065-RB | 186..322 | 110..246 | 250 | 78.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7657734..7658150 | 367..783 | 2085 | 100 | Plus |
| 2R | 25286936 | 2R | 7657410..7657675 | 101..366 | 1330 | 100 | Plus |
| 2R | 25286936 | 2R | 7658220..7658437 | 784..1001 | 1090 | 100 | Plus |
| 2R | 25286936 | 2R | 7657213..7657299 | 17..103 | 435 | 100 | Plus |
| 2R | 25286936 | 2R | 7664040..7664176 | 110..246 | 250 | 78.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:04:43 has no hits.
BS21094.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:16 Download gff for
BS21094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30495-RA | 18..999 | 17..998 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:16 Download gff for
BS21094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30495-RA | 44..1025 | 17..998 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:48 Download gff for
BS21094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30495-RA | 44..1025 | 17..998 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:48 Download gff for
BS21094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7657213..7657298 | 17..102 | 100 | -> | Plus |
| 2R | 7657412..7657675 | 103..366 | 100 | -> | Plus |
| 2R | 7657734..7658150 | 367..783 | 100 | -> | Plus |
| 2R | 7658220..7658434 | 784..998 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:16 Download gff for
BS21094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3544718..3544803 | 17..102 | 100 | -> | Plus |
| arm_2R | 3544917..3545180 | 103..366 | 100 | -> | Plus |
| arm_2R | 3545239..3545655 | 367..783 | 100 | -> | Plus |
| arm_2R | 3545725..3545939 | 784..998 | 100 | | Plus |
BS21094.pep Sequence
Translation from 16 to 999
> BS21094.pep
MEIVIRFLQSIAPVFLAHGIVGIIAFCVRLYMQGGKFRKQTDETGKVAIV
TGGNTGLGKETVMELARRGATVYMACRNKEKVERARREIVKETGNSNVFS
RECDLSSLDSIRKFAENFKKEQRVLHILINNAGVFWEPHRLTKEGFEMHL
GVNHIGHFLLTNLLLGVLERSAPSRVVVVASRAHERGQIKVDDINSSDFY
DEGVAYCQSKLANILFTRELAKRLEGTGVTVNALNPGIADTEIARNMIFF
QTKFAQTILRPLLWAVMKTPKNGAQTTLYAALDPDLERVSGQYFSDCALA
PVAPAALDDQMAQWLWAQSEKWAKIAL*
BS21094.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:59:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30495-PA | 327 | CG30495-PA | 1..327 | 1..327 | 1677 | 100 | Plus |
| CG30495-PB | 331 | CG30495-PB | 1..331 | 1..327 | 1662 | 98.8 | Plus |
| CG2064-PA | 330 | CG2064-PA | 9..320 | 11..322 | 1093 | 64.7 | Plus |
| CG30491-PB | 331 | CG30491-PB | 6..324 | 7..324 | 1016 | 62.4 | Plus |
| CG30491-PA | 331 | CG30491-PA | 6..324 | 7..324 | 1016 | 62.4 | Plus |
