BS21102.complete Sequence
830 bp assembled on 2011-01-18
GenBank Submission: KX802467
> BS21102.complete
GAAGTTATCAGTCGACATGTTTGCCCATATGCTGGACTTCCTGAATCGAT
CGCCACCGGATCCTGTGCGTCTTCCGTTGACCAGCAGCCACTGGCCGGTG
TTGACCATCCTTGGAATCTATCTAGTCTTCATAAAAATAGTGGGTCCTTG
GTTTATGCAGAATCAAAAGCCCTACAATCTGGATAGAGCTATCAAGATCT
ACAACATCGTGCAAATCGCATACAATGTCATTTTGTTAATATTTAGTGTG
CACTTCATGCTTGGTCCTGGCAACTATAACTTCAGTTGCATATCCAATCT
GCCGTTGGATCATGAGTACAAGAACTGGGAGCGTTGGCTCAGTTACTCCT
ACTTCTTCAACAAGCTCATGGATCTGCTGGAGACTGTGTTCTTTATATTC
AGAAAGAAGTATCGCCAGATATCGTTCCTGCACGTTTTCCACCACGTATA
CATGGTGTACATAGGCTTCTTGTACATGTATTATTATGGATACGGCGGCC
ATGGATTCTTCTTGATCACCTTCAACGTGGTGGTGCACACCATGATGTAC
ACCTACTACTACCAGTCGTCCCTCAATCGGAACTCGGGTGGCGATCTCTG
GTGGAAGAAATACATCACAGTCGTTCAGCTTGTCCAATTTGTTATTATAT
TCTCGCACAGCGTCTATATCCTCCGGCAAACTGATTGTCAAACATCACGA
TTATCGGCAACTTGGGGCTCACTGATATCTGTAGTATTTATAATTCTATT
TAGTAACTTCTACGTTCGCACCTACATTCTTCCCAAGAAAACGAAATCGG
CGGTGGGCCGATGAAAGCTTTCTAGACCAT
BS21102.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:07:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9459-RA | 798 | CG9459-PA | 1..798 | 17..814 | 3990 | 100 | Plus |
| CG9458-RA | 795 | CG9458-PA | 184..625 | 200..641 | 845 | 79.4 | Plus |
| CG8534-RA | 798 | CG8534-PA | 268..426 | 287..445 | 360 | 81.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9459-RA | 901 | CG9459-RA | 26..827 | 13..814 | 4010 | 100 | Plus |
| CG9458-RA | 900 | CG9458-RA | 194..635 | 200..641 | 845 | 79.4 | Plus |
| CG8534-RA | 990 | CG8534-RA | 326..484 | 287..445 | 360 | 81.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9817502..9818071 | 814..245 | 2850 | 100 | Minus |
| 3R | 32079331 | 3R | 9818139..9818370 | 244..13 | 1160 | 100 | Minus |
| 3R | 32079331 | 3R | 9819179..9819573 | 641..247 | 790 | 80 | Minus |
| 3R | 32079331 | 3R | 9813275..9813433 | 287..445 | 360 | 81.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:07:26 has no hits.
BS21102.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:34 Download gff for
BS21102.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9459-RA | 36..826 | 23..813 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:19 Download gff for
BS21102.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9459-RA | 36..826 | 23..813 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:46 Download gff for
BS21102.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9459-RA | 36..826 | 23..813 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:46 Download gff for
BS21102.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9817503..9818071 | 245..813 | 100 | <- | Minus |
| 3R | 9818139..9818360 | 23..244 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:19 Download gff for
BS21102.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5643225..5643793 | 245..813 | 100 | <- | Minus |
| arm_3R | 5643861..5644082 | 23..244 | 100 | | Minus |
BS21102.pep Sequence
Translation from 16 to 813
> BS21102.pep
MFAHMLDFLNRSPPDPVRLPLTSSHWPVLTILGIYLVFIKIVGPWFMQNQ
KPYNLDRAIKIYNIVQIAYNVILLIFSVHFMLGPGNYNFSCISNLPLDHE
YKNWERWLSYSYFFNKLMDLLETVFFIFRKKYRQISFLHVFHHVYMVYIG
FLYMYYYGYGGHGFFLITFNVVVHTMMYTYYYQSSLNRNSGGDLWWKKYI
TVVQLVQFVIIFSHSVYILRQTDCQTSRLSATWGSLISVVFIILFSNFYV
RTYILPKKTKSAVGR*
BS21102.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:00:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9459-PA | 265 | CG9459-PA | 1..265 | 1..265 | 1431 | 100 | Plus |
| CG9458-PA | 264 | CG9458-PA | 1..260 | 1..260 | 1025 | 69.6 | Plus |
| CG8534-PA | 265 | CG8534-PA | 1..262 | 5..263 | 709 | 53.2 | Plus |
| eloF-PA | 257 | CG16905-PA | 3..252 | 12..262 | 617 | 48 | Plus |
| CG16904-PA | 262 | CG16904-PA | 1..257 | 5..261 | 608 | 43.2 | Plus |
