BS21109.complete Sequence
1016 bp assembled on 2011-01-18
GenBank Submission: KX801234
> BS21109.complete
GAAGTTATCAGTCGACATGGCCTGGTTAACTAAAATAATCATTATATTTA
TCCTTTTGCTACACACTCAATTGACTCAACTGATACAGTATATTGACGAT
GGTGACACATTTGATGGCTTTAACTCCATATTTGAAAAGCCAAAGAAGCA
ACGAAGCGGTGCCATGGAGGACGATTTCGATCGAGATCGGGATCAGTGGA
AGGTCAATACCGACATGGACTCGCAATCGGGCATATGTCCCGCCGAAAAT
CCGAATGATGTGAAGTATGAAAAGAAGGATCGCTGCAAGGTTGACAGGAA
GATGGTCAAGGACGAGGACGATGACGAGAATGCCGATCCTGCGGGCAATA
GTGATGACGATGATATCCATGATGGTGATGAAGACAATGGCGATGATGAG
GCTTATGAAGAGGAGGACGACGACATTAGTTTTGAGGATGAAGCTTTTGT
TTCGAGAATTAACTGTTTGTTGGGATCTCTGCACAAGCACACCAAAGCCA
TAACCGATAATCTGCAGATCCTTCAATCCCGCTTGTCAAAAGCGAAAAAT
GACAACATATGCAGAAACAACAACCAAGGCACTACGCCTACGGAACATCC
TAGTCTGAAATGGTCCAAGAAGCCGGATTTCTATGAGGCAACCGAGCTGT
GTGCTGATGACAACTGCCATTTCGAGGACAGTGTGGATAACAAAGAGGTC
CAGCCACAAGCTTTTACTGAGGATCGTCGAGTGATGGTTCCGCCTCTATT
GCAACTCTTCCATGGTCCTGTCCAGCTGCAAACCACTTTGAACAGCGGCC
AGGACATCACGGGATCAAAGTCGAGATATTGGATGACCTCACCGGAAACA
TCAGAGGAGTTTCAGGCTTCATCGCAATTACAGCCGGATGAAAAAAATCA
AGAACGATACGAGGATTACGATGCTAAATTGCGTCGCCTCATGGACAGTC
GGGATGAGATCGAGCGAAATGTGATGAGAATGATAACTCCGGATTTATAA
AAGCTTTCTAGACCAT
BS21109.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:07:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43996-RA | 984 | CG43996-PA | 1..984 | 17..1000 | 4920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43996-RA | 1067 | CG43996-RA | 21..1006 | 17..1002 | 4930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17022324..17023309 | 17..1002 | 4930 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:07:42 has no hits.
BS21109.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:36 Download gff for
BS21109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12433-RB | 21..1002 | 17..998 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:26 Download gff for
BS21109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43996-RA | 21..1002 | 17..998 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:50 Download gff for
BS21109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43996-RA | 21..1002 | 17..998 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:50 Download gff for
BS21109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17022324..17023305 | 17..998 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:26 Download gff for
BS21109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16916357..16917338 | 17..998 | 100 | | Plus |
BS21109.pep Sequence
Translation from 16 to 999
> BS21109.pep
MAWLTKIIIIFILLLHTQLTQLIQYIDDGDTFDGFNSIFEKPKKQRSGAM
EDDFDRDRDQWKVNTDMDSQSGICPAENPNDVKYEKKDRCKVDRKMVKDE
DDDENADPAGNSDDDDIHDGDEDNGDDEAYEEEDDDISFEDEAFVSRINC
LLGSLHKHTKAITDNLQILQSRLSKAKNDNICRNNNQGTTPTEHPSLKWS
KKPDFYEATELCADDNCHFEDSVDNKEVQPQAFTEDRRVMVPPLLQLFHG
PVQLQTTLNSGQDITGSKSRYWMTSPETSEEFQASSQLQPDEKNQERYED
YDAKLRRLMDSRDEIERNVMRMITPDL*
BS21109.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:00:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43996-PA | 327 | CG43996-PA | 1..327 | 1..327 | 1749 | 100 | Plus |