BS21120.complete Sequence
1058 bp assembled on 2011-01-18
GenBank Submission: KX800671
> BS21120.complete
GAAGTTATCAGTCGACATGGAGACAACTAAAGTGAAGGAGCCGGATCAGA
GTGGGGACTCCATCCACAAGAAACGTGATGCCATCTGGCCACTGGTTCTC
TTCTATATCCACTTAAATATCCTCGGTGTCTATGGGATTTACGTTCTGCT
CACTAGCGCGTCGTGGGCCACGATTTTATTCACCGCCCTGCTCACCCTCC
TTGGCACTTTGGGCGTGACAGTGGGCGTTCATCGTTTGTGGGCGCACAGG
ACCTTCACCGCCTCCAAGCCCCTGAAGGTTTTCCTCATGTTCTGCCAGAC
GACCGCCGGTCAGGGCTCCATCTACAGTGTGGTTCAGGCCCATCGCCTCC
ATCATGCCAAGTTCCAGCAGGACGAGGATCCCTACTACAGTAAACACAGC
TTCATGTACGCCCAGGTGCGCGGCGGTCTTCTGAAGTACTCGCCACAGCA
GGAGGAACTGCTCAAGGATGTGGATATGTCGGACCTGGAAAGTGATCCTG
TGGTCATGTTTCAGAAGAGATTCTATGTCCTGCTGTACATCTTCCTAAAC
GTACTGCTATCGGTGAACACTCCGTTCCAGTACTTTGGGGACTCCCTAGC
CACCTCCATGTTCGTGGGTTTCTGGCTGCGCAGTCTGATCGTTATCAACC
TAGGAAACCTGGTTCACTCATCCCACTTTATTTGGAGCATTCACAAGGGC
TTTAAGCCCACCGATTCCAACAGTATCTTCCTGATCACAAAGAGTTACTG
GCCGCAGTACCACTATCTGCTGCCCAGGGACTACCAGAGTGGGGAGTACG
GCAACTATGCCTCTGGCATTGGGTCTTCCATGATCCGCGTGTTCGCCGCC
CTCGACTGGGCCAAGGATCTGAAGACCATTGGATCCGTGGCCGTTCGCCA
GGGACTGACCAAGGCGGTGGAGACTGGTCGTCCGATCGTCGAGTGCATCG
AGGAACAAGTGGAGCTGGAGGAAAACGCCCTGCCCGCCAACCATTTCCTC
AACCGGGAGAAGTTTATGTGAAAGCTTTCTAGACCATTCGTTTGGCGCGC
GAAACGGG
BS21120.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:08:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15531-RA | 1005 | CG15531-PA | 1..1005 | 17..1021 | 5025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:08:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15531-RA | 1158 | CG15531-RA | 61..1065 | 17..1021 | 5025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:08:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30194883..30195386 | 1021..518 | 2520 | 100 | Minus |
| 3R | 32079331 | 3R | 30195447..30195656 | 519..310 | 1050 | 100 | Minus |
| 3R | 32079331 | 3R | 30196003..30196168 | 182..17 | 830 | 100 | Minus |
| 3R | 32079331 | 3R | 30195779..30195910 | 314..183 | 660 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 16:08:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1997..2062 | 587..522 | 114 | 63.6 | Minus |
BS21120.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:39 Download gff for
BS21120.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15531-RA | 61..1067 | 17..1025 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:35 Download gff for
BS21120.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15531-RA | 61..1067 | 17..1025 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:59 Download gff for
BS21120.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15531-RA | 61..1067 | 17..1025 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:59 Download gff for
BS21120.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30195780..30195910 | 183..313 | 100 | <- | Minus |
| 3R | 30196003..30196168 | 17..182 | 100 | | Minus |
| 3R | 30194881..30195384 | 520..1025 | 99 | <- | Minus |
| 3R | 30195447..30195652 | 314..519 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:35 Download gff for
BS21120.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26021725..26021890 | 17..182 | 100 | | Minus |
| arm_3R | 26021502..26021632 | 183..313 | 100 | <- | Minus |
| arm_3R | 26020603..26021106 | 520..1025 | 99 | <- | Minus |
| arm_3R | 26021169..26021374 | 314..519 | 100 | <- | Minus |
BS21120.pep Sequence
Translation from 16 to 1020
> BS21120.pep
METTKVKEPDQSGDSIHKKRDAIWPLVLFYIHLNILGVYGIYVLLTSASW
ATILFTALLTLLGTLGVTVGVHRLWAHRTFTASKPLKVFLMFCQTTAGQG
SIYSVVQAHRLHHAKFQQDEDPYYSKHSFMYAQVRGGLLKYSPQQEELLK
DVDMSDLESDPVVMFQKRFYVLLYIFLNVLLSVNTPFQYFGDSLATSMFV
GFWLRSLIVINLGNLVHSSHFIWSIHKGFKPTDSNSIFLITKSYWPQYHY
LLPRDYQSGEYGNYASGIGSSMIRVFAALDWAKDLKTIGSVAVRQGLTKA
VETGRPIVECIEEQVELEENALPANHFLNREKFM*
BS21120.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:00:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15531-PA | 334 | CG15531-PA | 1..334 | 1..334 | 1751 | 100 | Plus |
| Fad2-PA | 355 | CG7923-PA | 38..330 | 19..307 | 478 | 34.5 | Plus |
| Desat1-PD | 383 | CG5887-PD | 71..347 | 23..295 | 453 | 31.8 | Plus |
| Desat1-PB | 383 | CG5887-PB | 71..347 | 23..295 | 453 | 31.8 | Plus |
| Desat1-PE | 383 | CG5887-PE | 71..347 | 23..295 | 453 | 31.8 | Plus |
