BS21124.complete Sequence
1214 bp assembled on 2011-01-18
GenBank Submission: KX804048
> BS21124.complete
GAAGTTATCAGTCGACATGGTCAAGCAAGTGGATTTTGCGGAGGTGAAGC
TCAGTGAGAAATTTCTCGGAGCTGGATCTGGTGGAGCGGTGCGCAAAGCC
ACCTTTCAAAATCAGGAGATTGCAGTAAAGATATTTGATTTCCTTGAGGA
AACAATCAAAAAGAATGCAGAGAGGGAAATCACACATTTGTCGGAGATCG
ACCACGAAAACGTTATCAGGGTGATCGGGAGGGCCAGCAATGGAAAGAAG
GACTACTTGTTGATGGAGTACCTGGAGGAGGGGTCCCTCCACAACTACCT
CTATGGCGATGACAAGTGGGAGTACACCGTGGAGCAAGCGGTTCGCTGGG
CACTCCAATGTGCCAAGGCCTTAGCATACTTGCATTCGTTGGATCGACCG
ATTGTTCACCGCGATATTAAGCCGCAAAACATGCTTTTATATAATCAGCA
TGAAGACTTAAAGATTTGTGACTTTGGCCTGGCGACGGATATGTCCAATA
ATAAGACCGATATGCAAGGAACATTGAGGTATATGGCTCCCGAGGCCATT
AAGCACTTAAAGTATACGGCTAAGTGTGATGTGTACAGCTTTGGAATAAT
GCTCTGGGAGCTGATGACACGTCAATTGCCATATAGTCACTTGGAAAACC
CCAACAGCCAGTACGCCATTATGAAAGCTATCAGTTCAGGCGAAAAACTT
CCAATGGAAGCAGTAAGATCCGATTGCCCAGAGGGTATCAAGCAATTAAT
GGAATGTTGCATGGATATAAATCCCGAAAAGCGCCCCTCTATGAAGGAGA
TCGAAAAGTTCCTTGGCGAACAGTATGAATCCGGCACTGACGAGGACTTT
ATCAAGCCTTTGGATGAGGATACCGTGGCTGTGGTGACCTACCATGTGGA
TTCGTCCGGCAGCAGGATAATGCGTGTTGATTTCTGGCGACATCAGTTGC
CATCGATCCGCATGACTTTTCCGATAGTGAAACGGGAAGCCGAAAGATTG
GGAAAGACCGTTGTCAGAGAAATGGCCAAGGCGGCGGCGGATGGAGATCG
GGAAGTTCGGCGGGCTGAGAAGGACACGGAGCGTGAAACCTCGAGGGCTG
CCCACAATGGAGAGCGGGAAACGCGGAGAGCGGGTCAGGATGTGGGTCGT
GAAACTGTACGGGCGGTCAAGAAAATAGGAAAGAAACTGCGCTTCTAAAA
GCTTTCTAGACCAT
BS21124.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:07:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Takl1-RA | 1182 | CG31421-PA | 1..1182 | 17..1198 | 5895 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Takl1-RA | 1323 | CG31421-RA | 34..1215 | 17..1198 | 5895 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20770936..20771446 | 1198..688 | 2555 | 100 | Minus |
| 3R | 32079331 | 3R | 20771786..20772110 | 690..366 | 1625 | 100 | Minus |
| 3R | 32079331 | 3R | 20772161..20772472 | 368..57 | 1545 | 99.7 | Minus |
| 3R | 32079331 | 3R | 20772527..20772568 | 58..17 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:07:46 has no hits.
BS21124.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:37 Download gff for
BS21124.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Takl1-RA | 34..1213 | 17..1196 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:27 Download gff for
BS21124.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Takl1-RA | 34..1213 | 17..1196 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:53 Download gff for
BS21124.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Takl1-RA | 34..1213 | 17..1196 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:53 Download gff for
BS21124.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20772162..20772470 | 59..367 | 99 | <- | Minus |
| 3R | 20772527..20772568 | 17..58 | 100 | | Minus |
| 3R | 20770938..20771444 | 690..1196 | 100 | <- | Minus |
| 3R | 20771787..20772108 | 368..689 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:27 Download gff for
BS21124.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16596660..16597166 | 690..1196 | 100 | <- | Minus |
| arm_3R | 16597509..16597830 | 368..689 | 100 | <- | Minus |
| arm_3R | 16597884..16598192 | 59..367 | 99 | <- | Minus |
| arm_3R | 16598249..16598290 | 17..58 | 100 | | Minus |
BS21124.pep Sequence
Translation from 16 to 1197
> BS21124.pep
MVKQVDFAEVKLSEKFLGAGSGGAVRKATFQNQEIAVKIFDFLEETIKKN
AEREITHLSEIDHENVIRVIGRASNGKKDYLLMEYLEEGSLHNYLYGDDK
WEYTVEQAVRWALQCAKALAYLHSLDRPIVHRDIKPQNMLLYNQHEDLKI
CDFGLATDMSNNKTDMQGTLRYMAPEAIKHLKYTAKCDVYSFGIMLWELM
TRQLPYSHLENPNSQYAIMKAISSGEKLPMEAVRSDCPEGIKQLMECCMD
INPEKRPSMKEIEKFLGEQYESGTDEDFIKPLDEDTVAVVTYHVDSSGSR
IMRVDFWRHQLPSIRMTFPIVKREAERLGKTVVREMAKAAADGDREVRRA
EKDTERETSRAAHNGERETRRAGQDVGRETVRAVKKIGKKLRF*
BS21124.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:00:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Takl1-PA | 393 | CG31421-PA | 1..393 | 1..393 | 2044 | 100 | Plus |
| Tak1-PA | 678 | CG18492-PA | 14..278 | 5..277 | 544 | 41.6 | Plus |
| Takl2-PB | 281 | CG4803-PB | 5..278 | 2..283 | 432 | 36.6 | Plus |
| wnd-PD | 950 | CG8789-PD | 128..488 | 4..376 | 360 | 27.8 | Plus |
| wnd-PC | 977 | CG8789-PC | 155..515 | 4..376 | 360 | 27.8 | Plus |
