Clone BS21127 Report

Search the DGRC for BS21127

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:211
Well:27
Vector:pDNR-Dual
Associated Gene/TranscriptCG32568-RB
Protein status:BS21127.pep: gold
Sequenced Size:1010

Clone Sequence Records

BS21127.complete Sequence

1010 bp assembled on 2011-01-18

GenBank Submission: KX802269

> BS21127.complete
GAAGTTATCAGTCGACATGAATAACTCCAAACGCTCGCGACTCAGCGACA
AGGATGAAGGTCCGTGCAAAATTCGAAAAGCGACCAACCTGTCGGATAAG
AAGGCAATCGTAGATCTATTCTCTAGTTTCGTGAATACACATCATTTTCG
ACCCAACCCCGATGGTCAGAGGATTGATAAAATAATTGTAATAAAGTTAG
TGGAACGCTTAGAAACTACAGATGTAAATGATCGCAAATTTATGCAGAGT
ATATTGCGGCGCGTCTATTTAAAGTGCACCGACTTGCGTCTATTTATTCG
AAATCAGCTCAACGATGTATTCTTTCGATTGATTTTCGAAGGAACTGACT
TTCATTGCATCCCAGAAATTCTGGAAATTTACTATGATATAATCAAGGGA
TTTACTCAACCATATGAGACTGAACATGAGCAACTGCTCTTTAAGATCCT
TTTGCCTTTGCACAAGCCGCCATCGTTAACAAAGTATTTTCATCAGCTGA
TAAAATGCATTATTGCATTCCTTAACCAATATCCATCTTTCATTGAAAAA
TATGTCAAAGGTCTTCTACGGCTCTGGCCGAAGACGTCCTTTACTAAGGT
GACATTGTTTCTAAGCGAGATTGCCAGAATTTTGGTAATAAAAAATGAGC
AAGAGGTCAAGAAAGTCATGCTGACGATTTTTAATCATATTGCAAAATGT
CTGTGTGATGAAAGCAATAAGATAGCCGAGCACACTCTTCTTTTGTGGAA
AAACAATGCGGTTTTGGAGGTTATACATCGAAACCACGCGCTCATCATGC
CCATTGTATATCCACACGTATTACGCGTATTGATACGTCATTATATGAGA
AAACCAATGCAAACGAATGCCTCCATTGCTTTATGTACTTTACTAAAAAT
GAACAATCCGATGCTTAGATGCCTGACTACTGTATGCATGAGCACCGATC
ATAGACCGATGAAACACGACGCCGAGAATTCTATACCTAAGTAGAAGCTT
TCTAGACCAT

BS21127.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:08:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG32568-RC 978 CG32568-PC 1..978 17..994 4890 100 Plus
CG32568-RB 978 CG32568-PB 1..978 17..994 4890 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:08:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG32568-RC 1818 CG32568-RC 99..1077 17..995 4895 100 Plus
CG32568-RB 1539 CG32568-RB 99..1077 17..995 4895 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:08:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16741524..16741857 388..721 1670 100 Plus
X 23542271 X 16741902..16742177 720..995 1380 100 Plus
X 23542271 X 16741237..16741429 195..387 965 100 Plus
X 23542271 X 16741004..16741183 17..196 900 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:08:32 has no hits.

BS21127.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:42 Download gff for BS21127.complete
Subject Subject Range Query Range Percent Splice Strand
CG32568-RB 99..1076 17..994 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:46 Download gff for BS21127.complete
Subject Subject Range Query Range Percent Splice Strand
CG32568-RB 99..1076 17..994 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:12 Download gff for BS21127.complete
Subject Subject Range Query Range Percent Splice Strand
CG32568-RB 99..1076 17..994 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:12 Download gff for BS21127.complete
Subject Subject Range Query Range Percent Splice Strand
X 16741239..16741429 197..387 100 -> Plus
X 16741004..16741183 17..196 100 -> Plus
X 16741524..16741857 388..721 100 -> Plus
X 16741904..16742176 722..994 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:46 Download gff for BS21127.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16635037..16635216 17..196 100 -> Plus
arm_X 16635272..16635462 197..387 100 -> Plus
arm_X 16635557..16635890 388..721 100 -> Plus
arm_X 16635937..16636209 722..994 100   Plus

BS21127.pep Sequence

Translation from 16 to 993

> BS21127.pep
MNNSKRSRLSDKDEGPCKIRKATNLSDKKAIVDLFSSFVNTHHFRPNPDG
QRIDKIIVIKLVERLETTDVNDRKFMQSILRRVYLKCTDLRLFIRNQLND
VFFRLIFEGTDFHCIPEILEIYYDIIKGFTQPYETEHEQLLFKILLPLHK
PPSLTKYFHQLIKCIIAFLNQYPSFIEKYVKGLLRLWPKTSFTKVTLFLS
EIARILVIKNEQEVKKVMLTIFNHIAKCLCDESNKIAEHTLLLWKNNAVL
EVIHRNHALIMPIVYPHVLRVLIRHYMRKPMQTNASIALCTLLKMNNPML
RCLTTVCMSTDHRPMKHDAENSIPK*

BS21127.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:00:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG32568-PC 325 CG32568-PC 1..325 1..325 1706 100 Plus
CG32568-PB 325 CG32568-PB 1..325 1..325 1706 100 Plus
wdb-PF 524 CG5643-PF 149..437 31..320 488 34.8 Plus
wdb-PE 524 CG5643-PE 149..437 31..320 488 34.8 Plus
wdb-PC 524 CG5643-PC 149..437 31..320 488 34.8 Plus