BS21127.complete Sequence
1010 bp assembled on 2011-01-18
GenBank Submission: KX802269
> BS21127.complete
GAAGTTATCAGTCGACATGAATAACTCCAAACGCTCGCGACTCAGCGACA
AGGATGAAGGTCCGTGCAAAATTCGAAAAGCGACCAACCTGTCGGATAAG
AAGGCAATCGTAGATCTATTCTCTAGTTTCGTGAATACACATCATTTTCG
ACCCAACCCCGATGGTCAGAGGATTGATAAAATAATTGTAATAAAGTTAG
TGGAACGCTTAGAAACTACAGATGTAAATGATCGCAAATTTATGCAGAGT
ATATTGCGGCGCGTCTATTTAAAGTGCACCGACTTGCGTCTATTTATTCG
AAATCAGCTCAACGATGTATTCTTTCGATTGATTTTCGAAGGAACTGACT
TTCATTGCATCCCAGAAATTCTGGAAATTTACTATGATATAATCAAGGGA
TTTACTCAACCATATGAGACTGAACATGAGCAACTGCTCTTTAAGATCCT
TTTGCCTTTGCACAAGCCGCCATCGTTAACAAAGTATTTTCATCAGCTGA
TAAAATGCATTATTGCATTCCTTAACCAATATCCATCTTTCATTGAAAAA
TATGTCAAAGGTCTTCTACGGCTCTGGCCGAAGACGTCCTTTACTAAGGT
GACATTGTTTCTAAGCGAGATTGCCAGAATTTTGGTAATAAAAAATGAGC
AAGAGGTCAAGAAAGTCATGCTGACGATTTTTAATCATATTGCAAAATGT
CTGTGTGATGAAAGCAATAAGATAGCCGAGCACACTCTTCTTTTGTGGAA
AAACAATGCGGTTTTGGAGGTTATACATCGAAACCACGCGCTCATCATGC
CCATTGTATATCCACACGTATTACGCGTATTGATACGTCATTATATGAGA
AAACCAATGCAAACGAATGCCTCCATTGCTTTATGTACTTTACTAAAAAT
GAACAATCCGATGCTTAGATGCCTGACTACTGTATGCATGAGCACCGATC
ATAGACCGATGAAACACGACGCCGAGAATTCTATACCTAAGTAGAAGCTT
TCTAGACCAT
BS21127.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:08:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32568-RC | 978 | CG32568-PC | 1..978 | 17..994 | 4890 | 100 | Plus |
CG32568-RB | 978 | CG32568-PB | 1..978 | 17..994 | 4890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:08:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32568-RC | 1818 | CG32568-RC | 99..1077 | 17..995 | 4895 | 100 | Plus |
CG32568-RB | 1539 | CG32568-RB | 99..1077 | 17..995 | 4895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:08:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16741524..16741857 | 388..721 | 1670 | 100 | Plus |
X | 23542271 | X | 16741902..16742177 | 720..995 | 1380 | 100 | Plus |
X | 23542271 | X | 16741237..16741429 | 195..387 | 965 | 100 | Plus |
X | 23542271 | X | 16741004..16741183 | 17..196 | 900 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:08:32 has no hits.
BS21127.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:42 Download gff for
BS21127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32568-RB | 99..1076 | 17..994 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:46 Download gff for
BS21127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32568-RB | 99..1076 | 17..994 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:12 Download gff for
BS21127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32568-RB | 99..1076 | 17..994 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:12 Download gff for
BS21127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16741239..16741429 | 197..387 | 100 | -> | Plus |
X | 16741004..16741183 | 17..196 | 100 | -> | Plus |
X | 16741524..16741857 | 388..721 | 100 | -> | Plus |
X | 16741904..16742176 | 722..994 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:46 Download gff for
BS21127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16635037..16635216 | 17..196 | 100 | -> | Plus |
arm_X | 16635272..16635462 | 197..387 | 100 | -> | Plus |
arm_X | 16635557..16635890 | 388..721 | 100 | -> | Plus |
arm_X | 16635937..16636209 | 722..994 | 100 | | Plus |
BS21127.pep Sequence
Translation from 16 to 993
> BS21127.pep
MNNSKRSRLSDKDEGPCKIRKATNLSDKKAIVDLFSSFVNTHHFRPNPDG
QRIDKIIVIKLVERLETTDVNDRKFMQSILRRVYLKCTDLRLFIRNQLND
VFFRLIFEGTDFHCIPEILEIYYDIIKGFTQPYETEHEQLLFKILLPLHK
PPSLTKYFHQLIKCIIAFLNQYPSFIEKYVKGLLRLWPKTSFTKVTLFLS
EIARILVIKNEQEVKKVMLTIFNHIAKCLCDESNKIAEHTLLLWKNNAVL
EVIHRNHALIMPIVYPHVLRVLIRHYMRKPMQTNASIALCTLLKMNNPML
RCLTTVCMSTDHRPMKHDAENSIPK*
BS21127.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:00:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32568-PC | 325 | CG32568-PC | 1..325 | 1..325 | 1706 | 100 | Plus |
CG32568-PB | 325 | CG32568-PB | 1..325 | 1..325 | 1706 | 100 | Plus |
wdb-PF | 524 | CG5643-PF | 149..437 | 31..320 | 488 | 34.8 | Plus |
wdb-PE | 524 | CG5643-PE | 149..437 | 31..320 | 488 | 34.8 | Plus |
wdb-PC | 524 | CG5643-PC | 149..437 | 31..320 | 488 | 34.8 | Plus |