Clone BS21128 Report

Search the DGRC for BS21128

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:211
Well:28
Vector:pDNR-Dual
Associated Gene/TranscriptCG3769-RA
Protein status:BS21128.pep: full length peptide match
Sequenced Size:1139

Clone Sequence Records

BS21128.complete Sequence

1139 bp assembled on 2011-01-18

GenBank Submission: KX802399

> BS21128.complete
GAAGTTATCAGTCGACATGCGCTTGCCGCTAATCTTTCATAGCCTGCACC
AGCGTCTTCAAAAAATGTTTGTAAAGAGAACTGAGGGCGGCGAAAGTGCC
ACGCCCAGCATTCAGGACATCGCCGGTCGACTGGCGGAGGAGCAGCAGCG
GCTTCGCCAATTGGAGGCCACAACGACTCCCAAAGAGCGGACAATTCTTG
TCTTGGGAAGCAAGTGTGTGGGTAAGACGACGGCCATTAATAAGTTCTTT
GATCGCGAGGAACACGCAACGCGGCCAACTCTAGCACTGGAGTACAGCTT
TGGACGACGGATTGGCAGTGGAAAGTCACCGCAGGTGATGAACGTTTGGG
AACTGGGCTCCCTGGACAATGCCGAGCAATTGCTGGAAGTACCAATGCGG
ACACATGGTTTGCAGCAACTAGCCGTCATCCTTATGCTAGATCTCTCCCA
GCCACAGCGATTTTGGACGGATTTGGAGTGCGCATACAAGGGACTGAGGG
ATACGGCGCAGCAGATGATGGAGAAGGTAACACCGGAGCTTAGGGAAATC
CTCGAACAGCGAACAGTGGAGCGAGTGGGTCAGCAGAACAAAGATTCGGA
AAAACTAGACCCTCTGCCCTTTCCAGTGATAATTGTCGGTGGGAAGTACG
ATGTGTTTTCTGGTTTCGATCCTATTATCAGGAAGCACACCTGCCGCTGC
TTGCGATCGATGGCCCACCTCATAGGTGGCGCATTGCTGTTCTATTCCCA
GAAGATGCCCAAGTTGGCCAAGGTCCTGAGGGACACCATTTGTCACTTGG
GATTTGGCAGTCCTGCTCATCCGTTCCGCTCTCATGTCGTGGACTTCAAT
GAACCACTGTGCATTTGGTTTGGAACGGACAGTTGGTCGAAAATTGGTGA
TACTGGCGCCCAAAGTGTGGAGCGAATTGGAGCCACATTCGGAATGGAAG
TACCGCAGCTGCAGCTAGAGAAGCAGAAGCTAAAAGAAACCACCGATCCG
GCCAAGGACCCTGGTTTCAAGGAGTTAGTCATCGATGAGATCCGATCGCA
GAAGAACGAGGAACTCGCAGGATTAATGAGGGATGTCTTGCTGCGCGGAA
AGTTCGAAAGTGTTCAAACTTAAAAGCTTTCTAGACCAT

BS21128.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:08:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG3769-RA 1107 CG3769-PA 1..1107 17..1123 5535 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:08:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG3769-RA 1333 CG3769-RA 112..1218 17..1123 5535 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:08:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9435824..9436727 220..1123 4520 100 Plus
2L 23513712 2L 9435510..9435714 17..221 1025 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:08:37 has no hits.

BS21128.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:43 Download gff for BS21128.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 1..1105 17..1121 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:48 Download gff for BS21128.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 112..1216 17..1121 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:14 Download gff for BS21128.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 112..1216 17..1121 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:14 Download gff for BS21128.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9435510..9435713 17..220 100 -> Plus
2L 9435825..9436725 221..1121 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:48 Download gff for BS21128.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9435510..9435713 17..220 100 -> Plus
arm_2L 9435825..9436725 221..1121 100   Plus

BS21128.pep Sequence

Translation from 16 to 1122

> BS21128.pep
MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLE
ATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIG
SGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFW
TDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPL
PFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKL
AKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS
VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEEL
AGLMRDVLLRGKFESVQT*

BS21128.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:00:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG3769-PA 368 CG3769-PA 1..368 1..368 1908 100 Plus