BS21132.complete Sequence
1385 bp assembled on 2011-01-18
GenBank Submission: KX802782
> BS21132.complete
GAAGTTATCAGTCGACATGGTTGTTCCGAGGATTAAGAAAAGAAGTCACA
GTAGGAAAATCGAGGCGACGCCAATGGATGTGGAGGAAAAAGATAATAAT
CGTGATCGTAAACACATTTTGAATCATCTATCGCGGGCACCCGGAAAATG
TATTTTGAGTAACTGCAATCAATTGGTTTTCCCATCGAATATGCTGGTAC
ACATGCTCCGCAAGCACAACAATAGTCCGAATACCAACTTGGCGATCATC
TATGACAATCAACGATTGCGTAAAACCTTCAATCTAAATAGTTTGAAATA
CGACGAACCGCAGGTGTTGAATATACTCCTGTATGCTGGCACCGAGGGTA
AGCCGCACACTCGACCAGCTCGCCGGTACTTGAGTTATCCCAATTGCGGT
CTACCTCATAGTTTCGGTCGGTACGAGCATCATTTAATGATGAATCTAAT
GATTTGCAAGACCTCTTGGTTCTCCATGCTGCCGGACAGAATATGCGGCG
AGAAGCTGGAGAAAATGCATGGTACGCCGGAGAACACCATATATGTTATA
TGGCTGATGGGCCCGGAGACCTCAAGTCGTATGTTTTATACGCTGACTGC
ATACGATCGTTACTATATACAATCGCGCAGTGTTATTCGGAAAACAAGGA
ACTTTTTTCTATCGCAGCAACCGAAGGACTTTCTCAATCACGAGAATGAT
TACCTGATGCTTCGCCATGAGGAGGCAATGGATTTGATGAACGGCGAGGG
TGACGAATTGAATCAGACATCGTACATTAAGTTGGAACTATTTTTGCACG
AGGAACCTAAACTGGTTTCGTTTCCCACACATTTGTTTCCGACTCCAATG
ATGTCAGATACAATAAGAATATTCCCACTATCATTTAAGGCGATTAATGT
TCTGCCCCCTAAAATGATGACGAAACAGAACTGGAAACGGGCCATAAGGA
TGTCCAGGAAAGGACCTGTGGCAGCGACTAAAACCGCGAAAGAATCAAAT
GACACCTCAGACGATCAAGAATACTCCTTTGATAGTAAAGTAAAAATTGA
GCTCCTTAAATATCTACACTCAGTGAGGATTCCTAAGGCCAAGAGAACGC
AAAAACAAGTCCAGAACGAAGATCAAGCAAAGCCTCTCGAGATGGATCCC
GTACTCTTGGAAGTACCAATCAAGAATAGAGTATTGAAAACTTTTAAGAA
TGCCATGGATAATTCGGTCAAGGACGCAGTGAGAAAGGTGACCGATGAGA
CGTTAATCGCTAACCTAGATATAAAGTCTGAATTGGAACTAGAACTAGAA
ATAAAACCGCGAAACCGACCAGCTGAAGCGAAAACGGAAGCTAAAAATGA
AACTGAAGCGCCACAGTAGAAGCTTTCTAGACCAT
BS21132.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:09:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12681-RA | 1353 | CG12681-PA | 1..1353 | 17..1369 | 6765 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:09:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12681-RA | 1594 | CG12681-RA | 123..1476 | 17..1370 | 6770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:08:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4875792..4877145 | 17..1370 | 6770 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:08:58 has no hits.
BS21132.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:45 Download gff for
BS21132.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12681-RA | 123..1475 | 17..1369 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:57 Download gff for
BS21132.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12681-RA | 123..1475 | 17..1369 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:21 Download gff for
BS21132.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12681-RA | 123..1475 | 17..1369 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:21 Download gff for
BS21132.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4875792..4877144 | 17..1369 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:57 Download gff for
BS21132.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4769825..4771177 | 17..1369 | 100 | | Plus |
BS21132.pep Sequence
Translation from 16 to 1368
> BS21132.pep
MVVPRIKKRSHSRKIEATPMDVEEKDNNRDRKHILNHLSRAPGKCILSNC
NQLVFPSNMLVHMLRKHNNSPNTNLAIIYDNQRLRKTFNLNSLKYDEPQV
LNILLYAGTEGKPHTRPARRYLSYPNCGLPHSFGRYEHHLMMNLMICKTS
WFSMLPDRICGEKLEKMHGTPENTIYVIWLMGPETSSRMFYTLTAYDRYY
IQSRSVIRKTRNFFLSQQPKDFLNHENDYLMLRHEEAMDLMNGEGDELNQ
TSYIKLELFLHEEPKLVSFPTHLFPTPMMSDTIRIFPLSFKAINVLPPKM
MTKQNWKRAIRMSRKGPVAATKTAKESNDTSDDQEYSFDSKVKIELLKYL
HSVRIPKAKRTQKQVQNEDQAKPLEMDPVLLEVPIKNRVLKTFKNAMDNS
VKDAVRKVTDETLIANLDIKSELELELEIKPRNRPAEAKTEAKNETEAPQ
*
BS21132.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:04:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12681-PA | 450 | CG12681-PA | 1..450 | 1..450 | 2362 | 100 | Plus |
| CG11227-PA | 753 | CG11227-PA | 486..734 | 3..242 | 230 | 23.7 | Plus |
| CG11227-PB | 764 | CG11227-PB | 497..745 | 3..242 | 230 | 23.7 | Plus |
| CG12682-PA | 237 | CG12682-PA | 17..225 | 42..249 | 151 | 26.6 | Plus |
