BS21133.complete Sequence
1514 bp assembled on 2011-01-18
GenBank Submission: KX806103
> BS21133.complete
GAAGTTATCAGTCGACATGTGGTTTAAGTTTCTAGATTACAAAATGCACT
GGCGACTTGTCATTGGTTTGCTGCTTCTAGCCAGCTTCAACCGGGAGACT
ATCGGAAAGAGATTTCTAAATCTAAAACCTATTCCCATTCAACATGAGGA
TGAGAGCTCCACTGAGGGATCTACTAATCCCACACCCACCAGCACAACAA
CACCATCAAATAGGGACATCACCATCGGTCCGTGCAAATGGGCTATAGGT
CGAAGTTGTCCGGATCCGGATGTCAAGTATTACATTTATACGCGCCACAA
TCCGATGGACAGACAGTGCCTTCACATAGACGAGTCACTGGAGAAGTCCA
ATCTGACTGACTCCTACTTCAACCCTCGATATCCCACTAAGATTATCATC
CACGGCTACAACTCCGATATGTTTCTACATCCCCTGCAACAGATGAGGGA
GGAGTACCTGGCAAAAGCGGATTATAATATCATATATGTGGACTGGAGTA
TCCTTTCGCCAGGACCCTGCTACATAAGTGCCGTTCATAACACCAAGCAC
GCTGGAACCTGCACAGCCCAGTTGGTAGAGCGCCTGGTGGAGACGGGCAA
TACGGATATCCACGTGATAGGCTTCTCATTGGGAGCTCAAGTGCCCAACT
ATATAGCCAGGAATTTAAGCTCTTTCATGCTGCCAAGGATTACGGGACTA
GATCCAGCGATGCCTCTTTTTATCACTTCCGGCAAGGCGGATAAACTGGA
TCCCAGCGATGCCAGCTATGTGGATGTGATACACACGAATGCATTGGTCC
AGGGGAAAATGGAGAGATGTGGTCATGCGGATTTTTACATGAACGGTGGA
ATCATGCAGCCGGGATGCAATGGACAGAAAATAAATTCCTTTGCTTGCAG
TCACCAACGTGCTCCAGCGTACTTTCTAGAATCCATCCGGTCACCCAAGG
GTTTTTGGGGATGGGCCTGCAGTGGCTACATATCCTACCTCCTGGGAATG
TGTCCCCCAACGAATTTTTTGCTTGAAGCTGGCGAAAATATACGGCCCAC
TACGAGAGGAATGTTTATGATAGACACCAATGACAGTTCGCCATTTGCCC
TGGGCAAGTGGACGGATCTACCCACATTGGGCGCAAAGCAGCCACAGTGG
CGAGTTCCGACCCAGAAACTGAAGGCGCCTCCAAATCAAGGTGTGGATCC
CCTACTGCATCACATCGATCAGTTTGGTAAACTGGCAGCCAACTTTAACA
ACCTTCAGATGTGGCCCACCGAGCAGGATCCCTACGAGCATTGGACGAGC
TTCAGTCCTGAACAGAAAGAGAACGATAGCGATGGTGATTCTGTTGAAGA
GCAGGATCCAGTGGAGTTTATTGAGCCAGATGACCGACAGATGATAAGTA
CAGAGGCGCGTCCCACGCAAAGCTGGTGGGATTACAGAAGGAATCTTACA
TATGGATTCATGGAGGATAACATATTTTCTGTGCCCACAGTGGATTAGAA
GCTTTCTAGACCAT
BS21133.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:09:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13282-RB | 1455 | CG13282-PB | 1..1455 | 44..1498 | 7275 | 100 | Plus |
| CG13282-RA | 1455 | CG13282-PA | 1..1455 | 44..1498 | 7275 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:09:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13282-RB | 1844 | CG13282-RB | 234..1716 | 16..1498 | 7415 | 100 | Plus |
| CG13282-RA | 1681 | CG13282-RA | 71..1553 | 16..1498 | 7415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:09:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16832193..16832806 | 1498..885 | 3070 | 100 | Minus |
| 2L | 23513712 | 2L | 16832865..16833297 | 884..452 | 2165 | 100 | Minus |
| 2L | 23513712 | 2L | 16833437..16833810 | 452..79 | 1870 | 100 | Minus |
| 2L | 23513712 | 2L | 16833864..16833928 | 80..16 | 325 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:09:03 has no hits.
BS21133.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:46 Download gff for
BS21133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13282-RA | 72..1553 | 17..1498 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:59 Download gff for
BS21133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13282-RA | 72..1553 | 17..1498 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:23 Download gff for
BS21133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13282-RA | 72..1553 | 17..1498 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:23 Download gff for
BS21133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16832193..16832806 | 885..1498 | 100 | <- | Minus |
| 2L | 16832865..16833296 | 453..884 | 100 | <- | Minus |
| 2L | 16833437..16833808 | 81..452 | 100 | <- | Minus |
| 2L | 16833864..16833927 | 17..80 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:59 Download gff for
BS21133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16832193..16832806 | 885..1498 | 100 | <- | Minus |
| arm_2L | 16832865..16833296 | 453..884 | 100 | <- | Minus |
| arm_2L | 16833437..16833808 | 81..452 | 100 | <- | Minus |
| arm_2L | 16833864..16833927 | 17..80 | 100 | | Minus |
BS21133.pep Sequence
Translation from 16 to 1497
> BS21133.pep
MWFKFLDYKMHWRLVIGLLLLASFNRETIGKRFLNLKPIPIQHEDESSTE
GSTNPTPTSTTTPSNRDITIGPCKWAIGRSCPDPDVKYYIYTRHNPMDRQ
CLHIDESLEKSNLTDSYFNPRYPTKIIIHGYNSDMFLHPLQQMREEYLAK
ADYNIIYVDWSILSPGPCYISAVHNTKHAGTCTAQLVERLVETGNTDIHV
IGFSLGAQVPNYIARNLSSFMLPRITGLDPAMPLFITSGKADKLDPSDAS
YVDVIHTNALVQGKMERCGHADFYMNGGIMQPGCNGQKINSFACSHQRAP
AYFLESIRSPKGFWGWACSGYISYLLGMCPPTNFLLEAGENIRPTTRGMF
MIDTNDSSPFALGKWTDLPTLGAKQPQWRVPTQKLKAPPNQGVDPLLHHI
DQFGKLAANFNNLQMWPTEQDPYEHWTSFSPEQKENDSDGDSVEEQDPVE
FIEPDDRQMISTEARPTQSWWDYRRNLTYGFMEDNIFSVPTVD*
BS21133.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:04:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13282-PB | 484 | CG13282-PB | 1..484 | 10..493 | 2651 | 100 | Plus |
| CG13282-PA | 484 | CG13282-PA | 1..484 | 10..493 | 2651 | 100 | Plus |
| CG14034-PC | 338 | CG14034-PC | 33..312 | 81..364 | 546 | 38.2 | Plus |
| CG14034-PB | 338 | CG14034-PB | 33..312 | 81..364 | 546 | 38.2 | Plus |
| CG34447-PA | 389 | CG34447-PA | 28..321 | 72..368 | 531 | 38.3 | Plus |
