BS21136.complete Sequence
860 bp assembled on 2011-01-18
GenBank Submission: KX806159
> BS21136.complete
GAAGTTATCAGTCGCCATGCATACTAATATACATAACATACTTAACGTGT
ATTTTACCTCGTGCCGAATTCGGCACGAGAATTTGATTGTGACTTCGCTC
TTTATGGATGAAAGTAAAAAATTCCTCCAGAACGTTGCCCATATCGCTGG
CAAATTGGATCTCAACCACTTGGAAAGAACCACGATGGCCTACAAACGTT
TATGTCTGGAACTAGAGTCCATGAGCAATGAGGTGACTCCAGCCGTTACT
CCTCCGACTTCGGCTTCTGCTTCTCCGCCGACCGCGGTCTCCCCTAATGG
ACTCCGAGCAAGTGCCTCAGAATTCGTGCCCCAGGTGCCGGTGACCAGTG
ACCGGATTCCCATTGAAATGGACAATGATGAACAGGATGATGATTCGGAT
GACGATGGCTACGATGAGGAGCGCAAGAGAGCTCCAAAGCCCGCAATATA
CGGCATCCGGTTTTATAACCATCATTACGAGTCCGACGACGTGAGCGAAA
ATCACTTGCAGGCGGAAAAGAAGCGAAAGTTGGGCTATAGGACTCCAAAG
TTTCGGCCAAACCAGCCGACTTGCCGGTCCCCAAAGTCGGAAACGGACTT
TATTCCCACTGCTAAGCCTCCGCCGGAATTGGCCAATGGACAGCCGCATT
TCAATGGACCCTACATGCCGCTTCTGCAGCACCGAATCGCCAACGCAGAG
GCCTACGGGCTCATCCAGGGTTCCGACGAGCGGAACAGCCTGCTCCTGGA
TGACATGGTTAAGCAACTGGCCCGCCTGGACAACTGTCCCGTCAATCTGA
GTTCACTTTTCCCGAAAAAAGGTGACCAGAAACCAGAACCCTAGAAGCTT
TCTAGACCAT
BS21136.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:08:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43317-RA | 741 | CG43317-PA | 1..741 | 104..844 | 3705 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:08:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43317-RA | 863 | CG43317-RA | 36..802 | 79..845 | 3835 | 100 | Plus |
| CG9896-RA | 2043 | CG9896-RA | 1237..1277 | 57..17 | 205 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:08:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15833523..15833934 | 845..434 | 2060 | 100 | Minus |
| 3R | 32079331 | 3R | 15834036..15834390 | 433..79 | 1775 | 100 | Minus |
| 2R | 25286936 | 2R | 22994435..22994475 | 17..57 | 205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:08:17 has no hits.
BS21136.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:41 Download gff for
BS21136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14876-RB | 36..801 | 79..844 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:40 Download gff for
BS21136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43317-RA | 36..801 | 79..844 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:04 Download gff for
BS21136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43317-RA | 36..801 | 79..844 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:04 Download gff for
BS21136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15833524..15833934 | 434..844 | 100 | <- | Minus |
| 3R | 15834036..15834390 | 79..433 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:40 Download gff for
BS21136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11659246..11659656 | 434..844 | 100 | <- | Minus |
| arm_3R | 11659758..11660112 | 79..433 | 100 | | Minus |
BS21136.pep Sequence
Translation from 16 to 843
> BS21136.pep
MHTNIHNILNVYFTSCRIRHENLIVTSLFMDESKKFLQNVAHIAGKLDLN
HLERTTMAYKRLCLELESMSNEVTPAVTPPTSASASPPTAVSPNGLRASA
SEFVPQVPVTSDRIPIEMDNDEQDDDSDDDGYDEERKRAPKPAIYGIRFY
NHHYESDDVSENHLQAEKKRKLGYRTPKFRPNQPTCRSPKSETDFIPTAK
PPPELANGQPHFNGPYMPLLQHRIANAEAYGLIQGSDERNSLLLDDMVKQ
LARLDNCPVNLSSLFPKKGDQKPEP*
BS21136.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:00:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43317-PA | 246 | CG14876-PB | 1..246 | 30..275 | 1306 | 100 | Plus |
