BS21143.complete Sequence
923 bp assembled on 2011-01-18
GenBank Submission: KX801227
> BS21143.complete
GAAGTTATCAGTCGACATGTTGATCGTACTACTGAGTGCTCTTGTGGCAC
CGTCAATTGTCAGTGCCGCATGTGGCCAGTGTGTGGATGCGCACAGTTGC
ATCGGTGAATCGGAGTTTCAGTTGTGCTACGATGGTGTCCGGGACCAGAC
TATCAACTACACTTGCCCCGAATCAAAACCCATTTGCACAACCTACGGAA
TTATTTGCATGCCCAACGGCACGAGTATAGAACGCGGCTGTGGTGATGTC
TCCAATTGTGGTGTTTGCTCAGAATCCACAACTTTTGCCTGTACTTCAAG
GACCACATTTGCTGTTTGCAACGGTGATGTTGTTTCCGCCAATAGTTTCG
ACTGTGCAGAAGACTTTGTCTGCAGTGTTAAAAATGCAGCCAGCGGAAGT
CCTTGTATTTCCCGGTGTGACTCATCAGACTCAGATATTTGTGATCGAGT
TTTGGAACCCGAAGTGGAAAGCACCACGGCATCAGTGACTCCCACTGTCA
CATCCACAGTCACTCCCATTGAGACTACTGCAGACCCATCCACAGTCATC
ACTGATTCATCGACAGGATCAACTGGGGATACCTCCACTGGATCGTCTTC
CGTAACTTCGTCGGACACATCAACGGACAGCACCGTGACTGTCACTGATT
CAGGAAGCACTACCCAAAGTACTGCAACAACTCCAGCATTCAATGAAGAC
ACCTATTGCCAAGAGATCAACTCAACGGGTCGCTATCCCATACCCAATGA
CACAGTGTGCACTAGCTACATCTACTGTGTTCTAAGGAGTGGAAGCTGGG
CAGGATTGCTCTATAATTGCAACGTGCAGAGACCTTATTTCGATGCTGAT
GTCTTCAGCTGTGGTACTGTGAAGCCATCTTATGCCGGATGCACTAATTT
AGTCTAAAAGCTTTCTAGACCAT
BS21143.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:09:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34426-RA | 891 | CG34426-PA | 1..891 | 17..907 | 4455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:09:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34426-RA | 1022 | CG34426-RA | 9..901 | 16..908 | 4465 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:09:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8802639..8803270 | 134..765 | 3160 | 100 | Plus |
3L | 28110227 | 3L | 8803334..8803478 | 764..908 | 725 | 100 | Plus |
3L | 28110227 | 3L | 8802471..8802591 | 16..136 | 605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:09:35 has no hits.
BS21143.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:50 Download gff for
BS21143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34426-RA | 15..898 | 22..905 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:13 Download gff for
BS21143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34426-RA | 15..898 | 22..905 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:32 Download gff for
BS21143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34426-RA | 15..898 | 22..905 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:32 Download gff for
BS21143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8802477..8802589 | 22..134 | 100 | -> | Plus |
3L | 8802640..8803270 | 135..765 | 100 | -> | Plus |
3L | 8803336..8803475 | 766..905 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:13 Download gff for
BS21143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8795577..8795689 | 22..134 | 100 | -> | Plus |
arm_3L | 8795740..8796370 | 135..765 | 100 | -> | Plus |
arm_3L | 8796436..8796575 | 766..905 | 100 | | Plus |
BS21143.pep Sequence
Translation from 16 to 906
> BS21143.pep
MLIVLLSALVAPSIVSAACGQCVDAHSCIGESEFQLCYDGVRDQTINYTC
PESKPICTTYGIICMPNGTSIERGCGDVSNCGVCSESTTFACTSRTTFAV
CNGDVVSANSFDCAEDFVCSVKNAASGSPCISRCDSSDSDICDRVLEPEV
ESTTASVTPTVTSTVTPIETTADPSTVITDSSTGSTGDTSTGSSSVTSSD
TSTDSTVTVTDSGSTTQSTATTPAFNEDTYCQEINSTGRYPIPNDTVCTS
YIYCVLRSGSWAGLLYNCNVQRPYFDADVFSCGTVKPSYAGCTNLV*
BS21143.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:04:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34426-PA | 296 | CG34426-PA | 1..296 | 1..296 | 1575 | 100 | Plus |
CG13312-PA | 342 | CG13312-PA | 14..330 | 1..293 | 272 | 28.1 | Plus |
CG34427-PB | 269 | CG34427-PB | 12..267 | 1..289 | 252 | 30.2 | Plus |
CG42525-PB | 377 | CG42525-PB | 152..375 | 77..288 | 235 | 28.4 | Plus |
CG42525-PA | 419 | CG42525-PA | 194..417 | 77..288 | 235 | 28.4 | Plus |