BS21151.complete Sequence
1475 bp assembled on 2011-01-18
GenBank Submission: KX802345
> BS21151.complete
GAAGTTATCAGTCGACATGTCGAAAAAGTGCTCCGTGCGATCGCTGAGCG
ACAGCGCCTTGGCGGAGCTGGCCAATCTCTTGGTGTCCACCATCAGCTAC
GCGCAGTATGCCCCGGACGTGCAGCTGGACATTAACATCGTCATGGTGGA
ACTGAACGAGTATCTGGCCCAGCTGGGAGCAACCCCCAATATATACCAGG
ATCTGCTCAGGGTGATCCTCAGCTCGGACTATCTGGACGCCAACATGCGG
TTCACCTGCCTGCAGATGCTGCTCAACTGTGGCGTTACTTTCCTGATGAC
CGAGGTGTTTCCCTTCAGCTACTACGAGAAGATCCTGCAGGTGATTGCAG
CCCAAGGCGCAGGACTGAGAGTGCTGAATATCAAGGGAATCTGGGTCAAG
GAGGAGCACATGCACTACATGTACGACATAGTGAGGAAATGCAAGCAGCT
GGTCAAGTTGTATGTGCCCTATATTGCCAACGATCGGCTGCTGGAGGAGA
TCGGTAACTGCTGCACCCGTCTGCAGATCCTGGACATTTCCGGCGAGACC
GACATCACGGAAATCGGCATCGATCTGCTGGCCAAGGGCGTGTGCTCACA
ATCACTAACCGTTGTGGATGTGGGCATGCCGGGCGAGGAGAACATCTGCT
ACTCGGACATTGCCCTCATCCTGGAGCACTGTCCCCAGGTAGAGACCCTC
TCCACTTACTCCTTTGTCGGCGCCTCCCTGAAGTTTATTCACGACAATGT
CGACGATCGCTTCAAGTGCCGACTGAAGTACATCCACGACACGGGCACGG
ATGAAGCCACCTTGCAGGTGATCATGCAGACGTGCCCCAGGCTGGAGACC
CTTTATCTGGACTCGCCCAAGACGGGTAGCCTGAGGGCTCTTAGTACTCG
CAATTTGCGCAAATTGAAGATCTACAAATTTGTGGTGGCCGAGCTACTGC
CCCTGCTGGAGCGTCCGATTGGCAGGAATCTGCGTCATCTCACCATGATC
AAGGGACTGGGGAACCTTGAGCTGGGCAAGCTGGCTCGCCTGTGTCCCTC
GCTCATTGATCTCGACTGCTATATGATCGACAGTCTGTCCTACGGAGCCG
GACACGCCAAGTTCCAGCAACTGGAGGGTCTGGAGATTCTGAGCAGCGCC
ATTCTGACCAGTTCTTTGAAGGCCTTCCTCTGCAATTCCACCGATCTGAA
GAGACTGGCGGTGGACACGGTGGAGTTCACCGACGATGATATTATGAGCA
TGTTTATGCAGCACGATTTCAAAGTTTTGGAGGATGTGTGGTTCACTCTA
GCGCCAGAGCTCACAGTGCAGTCTGTGGAGTTATTAATGGACAGCTGCCC
GGAACTGCAGTCCGTGGGTCAACTGAACGGCTGGTCGCTGACGCCCGATG
ATTTGGCGCTGATTCGTGGACTCCTCAAAAGCGGCAATTCGAGCATTCGC
CTTCAATAGAAGCTTTCTAGACCAT
BS21151.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:00:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15412-RB | 1443 | CG15412-PB | 1..1443 | 17..1459 | 7200 | 99.9 | Plus |
| CG15412-RC | 1461 | CG15412-PC | 1..1431 | 17..1447 | 7140 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15412-RB | 1859 | CG15412-RB | 301..1746 | 14..1459 | 7215 | 99.9 | Plus |
| CG15412-RC | 1889 | CG15412-RC | 301..1734 | 14..1447 | 7155 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3374121..3375031 | 1248..338 | 4540 | 99.9 | Minus |
| 2L | 23513712 | 2L | 3375083..3375411 | 342..14 | 1645 | 100 | Minus |
| 2L | 23513712 | 2L | 3373811..3373929 | 1447..1329 | 595 | 100 | Minus |
| 2L | 23513712 | 2L | 3373984..3374067 | 1330..1247 | 420 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:00:09 has no hits.
BS21151.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:40 Download gff for
BS21151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15412-RB | 304..1746 | 17..1459 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:18 Download gff for
BS21151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15412-RB | 304..1746 | 17..1459 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:59 Download gff for
BS21151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15412-RB | 304..1746 | 17..1459 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:59 Download gff for
BS21151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3375085..3375408 | 17..340 | 100 | | Minus |
| 2L | 3373811..3373927 | 1331..1447 | 100 | <- | Minus |
| 2L | 3373984..3374065 | 1249..1330 | 100 | <- | Minus |
| 2L | 3374121..3375028 | 341..1248 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:18 Download gff for
BS21151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3373811..3373927 | 1331..1447 | 100 | <- | Minus |
| arm_2L | 3373984..3374065 | 1249..1330 | 100 | <- | Minus |
| arm_2L | 3374121..3375028 | 341..1248 | 99 | <- | Minus |
| arm_2L | 3375085..3375408 | 17..340 | 100 | | Minus |
BS21151.pep Sequence
Translation from 16 to 1458
> BS21151.pep
MSKKCSVRSLSDSALAELANLLVSTISYAQYAPDVQLDINIVMVELNEYL
AQLGATPNIYQDLLRVILSSDYLDANMRFTCLQMLLNCGVTFLMTEVFPF
SYYEKILQVIAAQGAGLRVLNIKGIWVKEEHMHYMYDIVRKCKQLVKLYV
PYIANDRLLEEIGNCCTRLQILDISGETDITEIGIDLLAKGVCSQSLTVV
DVGMPGEENICYSDIALILEHCPQVETLSTYSFVGASLKFIHDNVDDRFK
CRLKYIHDTGTDEATLQVIMQTCPRLETLYLDSPKTGSLRALSTRNLRKL
KIYKFVVAELLPLLERPIGRNLRHLTMIKGLGNLELGKLARLCPSLIDLD
CYMIDSLSYGAGHAKFQQLEGLEILSSAILTSSLKAFLCNSTDLKRLAVD
TVEFTDDDIMSMFMQHDFKVLEDVWFTLAPELTVQSVELLMDSCPELQSV
GQLNGWSLTPDDLALIRGLLKSGNSSIRLQ*
BS21151.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:04:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15412-PB | 480 | CG15412-PB | 1..480 | 1..480 | 2451 | 100 | Plus |
| CG15412-PC | 486 | CG15412-PC | 1..479 | 1..479 | 2438 | 99.8 | Plus |
