BS21152.complete Sequence
1301 bp assembled on 2011-01-18
GenBank Submission: KX806021
> BS21152.complete
GAAGTTATCAGTCGACATGATGGAGACATTCCTCGTCCTGGGCCTGTGTT
TCATCCTGTACGAGGCATTGGATTTCTTTCAGGGCTGCATTCACAGTAAT
ACCCCATCGCCCAGCGATCAAATCGAAGCCTATCGCCGCGAACTCGACGA
ACAGCGCCAGCAGCAGCAGCAGGAACAATTCCTGGCAGGATTGACGCCGT
TGCTAGGCGCTCAATTTGCCGCTGCCGCCGCCGCCGCGGCTGCTGCCGCC
GGTTCGCAGTCGACGTTGGGCAGCACGACCACGCCCACCGCCTCCACGGC
CAGCGTGATAAGTGATTCATACGATCAGGAATCGCAATCGCAATCGCAAT
CTCAATCACAGTCCCAGTCGCAATCCAATCAAAATCAACAGCATTCGCTA
AGCACTCCTGGCCTGTTTCGTCCCGCCGCCTTGGGCTACTACGATCCGGA
GGATCCATTGCATGCCACAAACTCCCTACCGCGCGACTTTTACTATCTAC
AGCAGCAGCAGCTAAAGAACAAGGTCAGCTCAAGATCGCTACTCTCCAAG
TTCTCATCGACCAATTCGGATAATCGCATACATCCGGAGGCTGGAGCCGG
TTCAGGGCATCATCATAGCGTACTTGGAGCAGCGTCTGTTATAACAAGTC
AACCCTTACCATCTGGCGGTGAGATACCATCCAGTCTCTTCGATCAGCCG
GGACAACCGGCTGTGGTTGTGCCACCACTGCAATTGCAACCCTCATCACC
GCTATTTGTGGAGCTTAAGAGGGCGATTATAAGTCAGAATCAAAGATCAC
AACCGATAAAGTATCAGGCAAGAGAATCAATCGAAGAGCCACAGTGCCCT
CAGTGCGAGGAAGAGCAGATACAGTATTTGGCCGAGACTTTGGACGATCT
TGCCGAATCCGAAGATCAGCGGTATTCGCCAGCCGAAGAGGAGGACGACG
ACGACGACGAAGAGGAGGAGGAGGAGGAAGAGGAGCAGAACGAAGAGCAG
GAGGATCGGGAGGAGCAGCATCCCTACGTGGGAGGAGCTACCAGTGAGCC
AGATATTTGTGCCGCCACACGACAACAGCTAACCAGGATTCATCACATCG
CCATTGACGACATCGCCACCGGACAGGAGCATCATCATCATCATCATCAC
CATCTCAGCATTTCGGGACAGGCAACGTCGTTGGGCGCCAATTCTCACGC
AGACTTCAGGGAAATCGAGTGCGAGCGACTGCGACGCAAGTGCGTTAGCG
TTAAGCGCATCTATAGCATATCGGAAAAGTTCTAAAAGCTTTCTAGACCA
T
BS21152.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:00:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15465-RB | 1269 | CG15465-PB | 1..1269 | 17..1285 | 6345 | 100 | Plus |
| CG15465-RA | 1269 | CG15465-PA | 1..1269 | 17..1285 | 6345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15465-RB | 19353 | CG15465-RB | 3189..4457 | 17..1285 | 6345 | 100 | Plus |
| CG15465-RA | 16076 | CG15465-RA | 533..1801 | 17..1285 | 6345 | 100 | Plus |
| rg-RR | 16076 | CG44835-RR | 533..1801 | 17..1285 | 6345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5175240..5176508 | 17..1285 | 6345 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:00:14 has no hits.
BS21152.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:41 Download gff for
BS21152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15465-RA | 512..1778 | 17..1283 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:19 Download gff for
BS21152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rg-RJ | 2515..3781 | 17..1283 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:02 Download gff for
BS21152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rg-RR | 533..1799 | 17..1283 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:02 Download gff for
BS21152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5175240..5176506 | 17..1283 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:19 Download gff for
BS21152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5069273..5070539 | 17..1283 | 100 | | Plus |
BS21152.pep Sequence
Translation from 16 to 1284
> BS21152.pep
MMETFLVLGLCFILYEALDFFQGCIHSNTPSPSDQIEAYRRELDEQRQQQ
QQEQFLAGLTPLLGAQFAAAAAAAAAAAGSQSTLGSTTTPTASTASVISD
SYDQESQSQSQSQSQSQSQSNQNQQHSLSTPGLFRPAALGYYDPEDPLHA
TNSLPRDFYYLQQQQLKNKVSSRSLLSKFSSTNSDNRIHPEAGAGSGHHH
SVLGAASVITSQPLPSGGEIPSSLFDQPGQPAVVVPPLQLQPSSPLFVEL
KRAIISQNQRSQPIKYQARESIEEPQCPQCEEEQIQYLAETLDDLAESED
QRYSPAEEEDDDDDEEEEEEEEEQNEEQEDREEQHPYVGGATSEPDICAA
TRQQLTRIHHIAIDDIATGQEHHHHHHHHLSISGQATSLGANSHADFREI
ECERLRRKCVSVKRIYSISEKF*
BS21152.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:04:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15465-PB | 422 | CG15465-PB | 1..422 | 1..422 | 2180 | 100 | Plus |
| CG15465-PA | 422 | CG15465-PA | 1..422 | 1..422 | 2180 | 100 | Plus |
