BS21153.complete Sequence
1004 bp assembled on 2011-01-18
GenBank Submission: KX800849
> BS21153.complete
GAAGTTATCAGTCGACATGGCAGCGCAGCTGAATCCATTCCGCAATGCCT
TCCGGCTGCCGTCCAAGCAGCGCATCAACTGGTTTCCCGGCCACATGACC
AAGGGTATGCGGCAAATTCAGCAAAAACTACGAAATGTAGACTGCATAGT
CGAGATTCACGATGCACGCATCCCATTGGCGGGCAGAAACTCCCAGTTCT
TTGACACAATCACCGGAAGTGGTGTTAAACCGCATATTCTGGTGCTGAAC
AAAGTCGATCTGCTGGGCGCCAAACAGCAGAAGAGCGTGCTCCAGCAGCT
GAGGAGACAGCAGCCCGAACTGCAGCACATCCTGTTCACCAACTGCAAGG
ATCAGCGCAACAACGGCGTGCTGGACATCCTGCCCCTGGCAACGCGCCTC
GTGAGCGAGAGCAGTCGCTTCAATCGCACCCAAGCTGCCGAGCACAATCT
GATGATCATCGGCGTGCCCAATGTGGGCAAGAGTTCCGTGATCAATGTGC
TGCGAAATGTGCATCTCAAGAAGAAGAGCGCCGCACGCGTGGGTGCCGAG
GCGGGTATAACTCGATCCGTCGGCGAACGCATCAAAATCCAAGAGAATCC
GCCTGTTTACATGATCGACACACCCGGCATCCTCCAGCCCTCCATTAAGG
ATGATGAAATGGGCATGAAACTGGCCCTGGTGGGCTGCCTTCCCGATCAT
ATTGTGGGCGAGGATCTGATAGCCGACTATCTGCTGTACTGGCTGAATAG
CCACCGCAAATACGACTACGTGGAGATGCTAAAGCTCAGCTCCGGACCCA
GTGACGACATCAGCGCCGTGCTGGCGGAGTACGCTCATCGGGAGGAGCTA
TTCCACAAGGTCAAGCAGTACGACGGACGCGTGGAGGTGATGACAAATTT
ATTGGCGGCCGCGCGAAAGTTCATTCACTTCTTTCGCTCCGGCCAGTTGG
GTCACATGAATCTGGACGAACCCAGTGGTTTCAGATAGAAGCTTTCTAGA
CCAT
BS21153.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:00:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17141-RA | 972 | CG17141-PA | 1..972 | 17..988 | 4860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17141-RA | 1099 | CG17141-RA | 73..1045 | 16..988 | 4865 | 100 | Plus |
| HP1c-RA | 986 | CG6990-RA | 881..986 | 988..883 | 530 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22746500..22747273 | 988..215 | 3870 | 100 | Minus |
| 3R | 32079331 | 3R | 22747327..22747527 | 216..16 | 1005 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:00:19 has no hits.
BS21153.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:42 Download gff for
BS21153.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17141-RA | 31..1002 | 17..988 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:21 Download gff for
BS21153.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17141-RA | 74..1045 | 17..988 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:04 Download gff for
BS21153.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17141-RA | 74..1045 | 17..988 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:04 Download gff for
BS21153.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22746500..22747272 | 216..988 | 100 | <- | Minus |
| 3R | 22747328..22747526 | 17..215 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:21 Download gff for
BS21153.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18572222..18572994 | 216..988 | 100 | <- | Minus |
| arm_3R | 18573050..18573248 | 17..215 | 100 | | Minus |
BS21153.pep Sequence
Translation from 16 to 987
> BS21153.pep
MAAQLNPFRNAFRLPSKQRINWFPGHMTKGMRQIQQKLRNVDCIVEIHDA
RIPLAGRNSQFFDTITGSGVKPHILVLNKVDLLGAKQQKSVLQQLRRQQP
ELQHILFTNCKDQRNNGVLDILPLATRLVSESSRFNRTQAAEHNLMIIGV
PNVGKSSVINVLRNVHLKKKSAARVGAEAGITRSVGERIKIQENPPVYMI
DTPGILQPSIKDDEMGMKLALVGCLPDHIVGEDLIADYLLYWLNSHRKYD
YVEMLKLSSGPSDDISAVLAEYAHREELFHKVKQYDGRVEVMTNLLAAAR
KFIHFFRSGQLGHMNLDEPSGFR*
BS21153.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:04:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17141-PA | 323 | CG17141-PA | 1..323 | 1..323 | 1667 | 100 | Plus |
