Clone BS21156 Report

Search the DGRC for BS21156

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:211
Well:56
Vector:pDNR-Dual
Associated Gene/TranscriptCG30259-RB
Protein status:BS21156.pep: full length peptide match
Sequenced Size:464

Clone Sequence Records

BS21156.complete Sequence

464 bp assembled on 2011-01-18

GenBank Submission: KX804390

> BS21156.complete
GAAGTTATCAGTCGACATGGGCAAAAAGGGTAAAGGAAAAGGCAACAAAT
TGGCCAACATGTCCGAGGAGGAGCGGGCCAGGTATTTGCAAATGAGGGCC
GACATGGAGGAAGAGACGAGGCGGCGGAAAATGCAGCTCATTTCCATGTA
CATGAAGAACAAACTGAAAAGAGAGGATGCTTTTGGTCGACTCAATATGG
CTAAAATCAACCAGGAGTGGCGGAGCATTTTGCGCCAGGTGAAAATCCAG
GAGCTGCGCCGCGAAATCGTCGATGTGGAGTCTTTCTTTCAGGAGGCACT
TAAGCGCAAGGACCAGGTGATCCATCGCCTCATTGCTCACATAGAATCCA
CCGAGGATATGTACGCCAATCTGCAGCAGTCACACATGGAGAATATCACC
AGGATAGTTGGTACGATTGGGATAACATCCTTAAAAATAACATTTTAAAA
GCTTTCTAGACCAT

BS21156.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:00:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG30259-RA 1623 CG30259-PA 1..398 17..414 1975 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG30259-RA 1771 CG30259-RA 49..447 16..414 1980 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:28
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22703897..22704189 448..156 1465 100 Minus
2R 25286936 2R 22704258..22704399 157..16 710 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:00:29 has no hits.

BS21156.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:44 Download gff for BS21156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30259-RB 50..479 17..446 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:26 Download gff for BS21156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30259-RA 50..457 17..423 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:08 Download gff for BS21156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30259-RA 50..457 17..423 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:08 Download gff for BS21156.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22703899..22704187 158..446 100 <- Minus
2R 22704258..22704398 17..157 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:26 Download gff for BS21156.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18591404..18591692 158..446 100 <- Minus
arm_2R 18591763..18591903 17..157 100   Minus

BS21156.pep Sequence

Translation from 16 to 447

> BS21156.pep
MGKKGKGKGNKLANMSEEERARYLQMRADMEEETRRRKMQLISMYMKNKL
KREDAFGRLNMAKINQEWRSILRQVKIQELRREIVDVESFFQEALKRKDQ
VIHRLIAHIESTEDMYANLQQSHMENITRIVGTIGITSLKITF*

BS21156.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:04:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG30259-PA 540 CG30259-PA 1..133 1..133 661 99.2 Plus