Clone BS21164 Report

Search the DGRC for BS21164

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:211
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG34457-RA
Protein status:BS21164.pep: full length peptide match
Sequenced Size:959

Clone Sequence Records

BS21164.complete Sequence

959 bp assembled on 2011-01-18

GenBank Submission: KX802239

> BS21164.complete
GAAGTTATCAGTCGACATGCCTTGCAGAGTCGGTGATATGGATTCTATTT
CCGCACGGTTTCAGCCCAGTGTAAGAATTGGCAATTGGGTCGAAGAAAAT
TGCCTTGAAGAGGACAAAATAGTAAACTTTAAGAAACAACGCGATCGCGG
CGAACTTTTAGTGGAAAAGGCGCGCACTTTGTATGATAATTTCCACAAGG
AGATCGTTTTGGCTGCTCCCAAGCAAACCATTATATTCGGGGCTATTGTG
CAATTAATGCCCATCCATATAAATATCAGTGATATGGATACAACCGATTT
GAATGCCGCTTTATCGGTGGTGATCAACGAAAAGGTGGTGCGAAAAAGCC
AGTCAATCAATGAGGATTGTGAGCTATCCGTGGCGCCCTCGAAGCGGCCT
TGTGTGCGAAACTCCTTTAAAATAGTCAGTGGAGATGGTCGGGATCGCAC
TGGTGAGAATATCAAATATGGACAGCGATTCCAGCTGCAGTGCATGGCCT
CGGAACACGATCCCATAGTACTGTACAGTGGGCCCAAGCGGTGCAATCTG
CAGCAGGGTGTCCATGCCACCTATTTGTCGCACAAAAACGGGGAGCTCAA
TCTCAACCTGGGACTTGTGCACCGCAGTAAATTATCATGCCCGGACAACG
ATATACCCATAGCATACACGAATTGGTTCTGCAGACATGTAAATCCAAAG
CAGCGTTTTGAAAGCGAAGGAGAAGATATACCTAGCAATTCCCCTTTGGT
AATCGTGCATGCGACCACAAATCGAAATCTAGCTGCCGAGAATGTTCTGA
TCCAAACCCTTTTTGGTCCCGAATTTCTGGTGTCCGTGCAAAACTATCGC
AATATCTACAGGCATGAGATTTGGAAGAACGTATGGATGATTAGCAACGG
ACACCAGACTGGATCAAAGTCTGCAAATTCTACGTCTCACTAAAAGCTTT
CTAGACCAT

BS21164.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:00:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG34457-RB 927 CG34457-PB 1..927 17..943 4635 100 Plus
CG34457-RA 927 CG34457-PA 1..927 17..943 4635 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG34457-RB 1267 CG34457-RB 88..1014 17..943 4635 100 Plus
CG34457-RA 1339 CG34457-RA 160..1086 17..943 4635 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16670638..16671155 111..628 2590 100 Plus
2R 25286936 2R 16671374..16671583 734..943 1050 100 Plus
2R 25286936 2R 16671214..16671318 629..733 525 100 Plus
2R 25286936 2R 16670485..16670581 17..113 485 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:00:38 has no hits.

BS21164.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:45 Download gff for BS21164.complete
Subject Subject Range Query Range Percent Splice Strand
CG34457-RA 160..1084 17..941 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:31 Download gff for BS21164.complete
Subject Subject Range Query Range Percent Splice Strand
CG34457-RA 160..1084 17..941 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:11 Download gff for BS21164.complete
Subject Subject Range Query Range Percent Splice Strand
CG34457-RA 160..1084 17..941 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:11 Download gff for BS21164.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16671374..16671581 734..941 100   Plus
2R 16671214..16671318 629..733 100 -> Plus
2R 16670485..16670580 17..112 100 -> Plus
2R 16670640..16671155 113..628 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:31 Download gff for BS21164.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12557990..12558085 17..112 100 -> Plus
arm_2R 12558145..12558660 113..628 100 -> Plus
arm_2R 12558719..12558823 629..733 100 -> Plus
arm_2R 12558879..12559086 734..941 100   Plus

BS21164.pep Sequence

Translation from 16 to 942

> BS21164.pep
MPCRVGDMDSISARFQPSVRIGNWVEENCLEEDKIVNFKKQRDRGELLVE
KARTLYDNFHKEIVLAAPKQTIIFGAIVQLMPIHINISDMDTTDLNAALS
VVINEKVVRKSQSINEDCELSVAPSKRPCVRNSFKIVSGDGRDRTGENIK
YGQRFQLQCMASEHDPIVLYSGPKRCNLQQGVHATYLSHKNGELNLNLGL
VHRSKLSCPDNDIPIAYTNWFCRHVNPKQRFESEGEDIPSNSPLVIVHAT
TNRNLAAENVLIQTLFGPEFLVSVQNYRNIYRHEIWKNVWMISNGHQTGS
KSANSTSH*

BS21164.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:04:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG34457-PB 308 CG34457-PB 1..308 1..308 1628 100 Plus
CG34457-PA 308 CG34457-PA 1..308 1..308 1628 100 Plus
CG15498-PA 281 CG15498-PA 2..277 15..290 701 47.3 Plus