BS21164.complete Sequence
959 bp assembled on 2011-01-18
GenBank Submission: KX802239
> BS21164.complete
GAAGTTATCAGTCGACATGCCTTGCAGAGTCGGTGATATGGATTCTATTT
CCGCACGGTTTCAGCCCAGTGTAAGAATTGGCAATTGGGTCGAAGAAAAT
TGCCTTGAAGAGGACAAAATAGTAAACTTTAAGAAACAACGCGATCGCGG
CGAACTTTTAGTGGAAAAGGCGCGCACTTTGTATGATAATTTCCACAAGG
AGATCGTTTTGGCTGCTCCCAAGCAAACCATTATATTCGGGGCTATTGTG
CAATTAATGCCCATCCATATAAATATCAGTGATATGGATACAACCGATTT
GAATGCCGCTTTATCGGTGGTGATCAACGAAAAGGTGGTGCGAAAAAGCC
AGTCAATCAATGAGGATTGTGAGCTATCCGTGGCGCCCTCGAAGCGGCCT
TGTGTGCGAAACTCCTTTAAAATAGTCAGTGGAGATGGTCGGGATCGCAC
TGGTGAGAATATCAAATATGGACAGCGATTCCAGCTGCAGTGCATGGCCT
CGGAACACGATCCCATAGTACTGTACAGTGGGCCCAAGCGGTGCAATCTG
CAGCAGGGTGTCCATGCCACCTATTTGTCGCACAAAAACGGGGAGCTCAA
TCTCAACCTGGGACTTGTGCACCGCAGTAAATTATCATGCCCGGACAACG
ATATACCCATAGCATACACGAATTGGTTCTGCAGACATGTAAATCCAAAG
CAGCGTTTTGAAAGCGAAGGAGAAGATATACCTAGCAATTCCCCTTTGGT
AATCGTGCATGCGACCACAAATCGAAATCTAGCTGCCGAGAATGTTCTGA
TCCAAACCCTTTTTGGTCCCGAATTTCTGGTGTCCGTGCAAAACTATCGC
AATATCTACAGGCATGAGATTTGGAAGAACGTATGGATGATTAGCAACGG
ACACCAGACTGGATCAAAGTCTGCAAATTCTACGTCTCACTAAAAGCTTT
CTAGACCAT
BS21164.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:00:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34457-RB | 927 | CG34457-PB | 1..927 | 17..943 | 4635 | 100 | Plus |
CG34457-RA | 927 | CG34457-PA | 1..927 | 17..943 | 4635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34457-RB | 1267 | CG34457-RB | 88..1014 | 17..943 | 4635 | 100 | Plus |
CG34457-RA | 1339 | CG34457-RA | 160..1086 | 17..943 | 4635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16670638..16671155 | 111..628 | 2590 | 100 | Plus |
2R | 25286936 | 2R | 16671374..16671583 | 734..943 | 1050 | 100 | Plus |
2R | 25286936 | 2R | 16671214..16671318 | 629..733 | 525 | 100 | Plus |
2R | 25286936 | 2R | 16670485..16670581 | 17..113 | 485 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:00:38 has no hits.
BS21164.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:45 Download gff for
BS21164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34457-RA | 160..1084 | 17..941 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:31 Download gff for
BS21164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34457-RA | 160..1084 | 17..941 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:11 Download gff for
BS21164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34457-RA | 160..1084 | 17..941 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:11 Download gff for
BS21164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16671374..16671581 | 734..941 | 100 | | Plus |
2R | 16671214..16671318 | 629..733 | 100 | -> | Plus |
2R | 16670485..16670580 | 17..112 | 100 | -> | Plus |
2R | 16670640..16671155 | 113..628 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:31 Download gff for
BS21164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12557990..12558085 | 17..112 | 100 | -> | Plus |
arm_2R | 12558145..12558660 | 113..628 | 100 | -> | Plus |
arm_2R | 12558719..12558823 | 629..733 | 100 | -> | Plus |
arm_2R | 12558879..12559086 | 734..941 | 100 | | Plus |
BS21164.pep Sequence
Translation from 16 to 942
> BS21164.pep
MPCRVGDMDSISARFQPSVRIGNWVEENCLEEDKIVNFKKQRDRGELLVE
KARTLYDNFHKEIVLAAPKQTIIFGAIVQLMPIHINISDMDTTDLNAALS
VVINEKVVRKSQSINEDCELSVAPSKRPCVRNSFKIVSGDGRDRTGENIK
YGQRFQLQCMASEHDPIVLYSGPKRCNLQQGVHATYLSHKNGELNLNLGL
VHRSKLSCPDNDIPIAYTNWFCRHVNPKQRFESEGEDIPSNSPLVIVHAT
TNRNLAAENVLIQTLFGPEFLVSVQNYRNIYRHEIWKNVWMISNGHQTGS
KSANSTSH*
BS21164.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:04:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34457-PB | 308 | CG34457-PB | 1..308 | 1..308 | 1628 | 100 | Plus |
CG34457-PA | 308 | CG34457-PA | 1..308 | 1..308 | 1628 | 100 | Plus |
CG15498-PA | 281 | CG15498-PA | 2..277 | 15..290 | 701 | 47.3 | Plus |