Clone BS21172 Report

Search the DGRC for BS21172

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:211
Well:72
Vector:pDNR-Dual
Associated Gene/TranscriptCG13283-RA
Protein status:BS21172.pep: full length peptide match
Sequenced Size:1991

Clone Sequence Records

BS21172.complete Sequence

1991 bp assembled on 2011-02-17

GenBank Submission: KX802963

> BS21172.complete
GAAGTTATCAGTCGACATGCGCTGGAAGCTTCAGTTTGTTTTATTCGCTA
TAATTCAAATAGTGAGGTCCCAGAATGGAGAAGATTCGGATTCAGATACG
GAAGTGGAAATGGATTCCGAGGTAGAATCGGGCCAGTTTTTTAGCCATTT
GTACAAGAGCAACTTGCAACAGTTGGTGAAAATTAAGAATGACTCAATGG
ATCCGTGTGATGACTTCTATGCACATGCTTGTGGAAACTTCGATCAAACG
AAGGAGGAAAATTCCGATGATTTTCTTCCACCCTATCTGTATAACAAACA
GGACAGAATGAACTTCTTCACAGCTGAGGTTGGAAATTTTGAAACTATAC
CAGGACGATTGATTTCTCAACTTTATACGGAATGCCGAAAGAGGGAAGAA
CGAAATGTTTTCACCCCTACTCGATTGACTTCTCACTGGGAACGTATGCT
CGATGAGATCCCATTCCTGGCCAGGCATAAAGAGGTGCTCTCTTCCTGGC
CTTTCCTTAAACATCAATGGGAGCGAAGGCGCCTTTATGGGCAGCTGAAT
TGGATAGTTCTGTCAGCACAACTGGCAGCCCATGGCCTACCCACTTTACT
TCATATCTACTTTGCCTTGGATACGATTTATGTGAGTCCCATGGAGGAGC
TGCCCTGTCCTAGTATCGCGGACTTTCAATCTAGCCTGTCTGATGTCTTG
GAAGGTAGACATCATCAAGTATCCCGTATAATATCACATGAGATGAGGGT
TCTGTGTCGCGAAATGAGAGGAGAACTTCCGCTCGTAAGAAGTTTGAGCC
AGAATACCAGAACCAACACCTCCAGACCAGGTGAAGAACAGCTTCTTCTG
GATGAAAACACCATGGATTATTTTCAGCAGTATTTTGCCGCACTTAACTT
CTCCGAGGAACGGCTGGTGGGAGCACGCAAGTTTCCTCTCGATGTCGAGA
AGATCACTCAAGCCTGGGAAGTTCTCAGACATACGGAAACTCGCATAGTG
TACAACTATGTGATGTGGCAGGCCAGGGAGCAGCTTCGATATCCGGACTG
CTATAGGGTATCTGAGGAATTCGAGAGACTACTGCACGCTGAATACTGGC
AATGGCATGTTTTGAGACGCCATCTGAGCAGGGAAGTCGCTCTGGCATCA
TATCAACTTCATACCACTCGCTTCCAAAAACTAAGGAGATCCAAGTTGTC
CAGAAGAGATTGGTATGGGCACCTGTGGCCAGCTTCTGTGGAGAAGAAGG
AGCTTCAGGTGGCACGCATCCTCCAAAATCATGCAGAAAACTATCTGAAT
ATAACTGAACTAAATGAAAACTACGAAGGATTGAAATTGGAAAAGAACTC
CTTTTATGCAAATCTTCTGATCCTTAGACGGGCTCAACTGCGCCATAGTT
TCGTATCGCCTTATGTGGACGAGGAAGATGTAAATCAGCCAGCATATTTC
TTGAGGCACTTCCTTCACTTTGTACTGCTTTCCTTGCACCGCCCTACTTA
TCACTATTATGCCACACACGGCTTGGAACTTTGGAGGGAGTCCCGACTTC
TCTTGGATACCGATGGCCACTATACCGCCATGGATTGCCTAGAACGGCAA
TCATTCCAACACTACGATGCAAAATTGGCTCCAATTTACAGACCACTTGG
TTCGCACGAGATCGCCGAGATCTTCCAGTTTTATCGCTCTTTTCAGTATT
CCCTCACGGACTATCACTTTTGGCTTCAGGGTGAAAGGTTCGCCTTTGCC
GAGACCTTTGTGCTGGACTACTTCGGATTGAATCCACACAGGGTACTCTT
CTATGCGGTGGCCCAGCAGTTATGTAACCGCCAAACGGAGATATTTGCTG
CCCAATTGAATAGGGGCTATATGAATCTTCCCGAGTTCCAGGAGGCTTTC
AAGTGCGGAGCCGAAAAGGCCATGAATCCCCCATCCAGATGCATGATCAA
CATGTGTGAAAGGCCACATACTTGAAAGCTTTCTAGACCAT

BS21172.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:26:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG13283-RA 1959 CG13283-PA 1..1959 17..1975 9795 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:26:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG13283-RA 2123 CG13283-RA 41..1999 17..1975 9795 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:26:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16835260..16837218 1975..17 9795 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:26:20 has no hits.

BS21172.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-17 10:41:49 Download gff for BS21172.complete
Subject Subject Range Query Range Percent Splice Strand
CG13283-RA 41..1998 17..1974 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:15:07 Download gff for BS21172.complete
Subject Subject Range Query Range Percent Splice Strand
CG13283-RA 41..1998 17..1974 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:10:36 Download gff for BS21172.complete
Subject Subject Range Query Range Percent Splice Strand
CG13283-RA 41..1998 17..1974 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:10:36 Download gff for BS21172.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16835261..16837218 17..1974 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:15:07 Download gff for BS21172.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16835261..16837218 17..1974 100   Minus

BS21172.pep Sequence

Translation from 16 to 1974

> BS21172.pep
MRWKLQFVLFAIIQIVRSQNGEDSDSDTEVEMDSEVESGQFFSHLYKSNL
QQLVKIKNDSMDPCDDFYAHACGNFDQTKEENSDDFLPPYLYNKQDRMNF
FTAEVGNFETIPGRLISQLYTECRKREERNVFTPTRLTSHWERMLDEIPF
LARHKEVLSSWPFLKHQWERRRLYGQLNWIVLSAQLAAHGLPTLLHIYFA
LDTIYVSPMEELPCPSIADFQSSLSDVLEGRHHQVSRIISHEMRVLCREM
RGELPLVRSLSQNTRTNTSRPGEEQLLLDENTMDYFQQYFAALNFSEERL
VGARKFPLDVEKITQAWEVLRHTETRIVYNYVMWQAREQLRYPDCYRVSE
EFERLLHAEYWQWHVLRRHLSREVALASYQLHTTRFQKLRRSKLSRRDWY
GHLWPASVEKKELQVARILQNHAENYLNITELNENYEGLKLEKNSFYANL
LILRRAQLRHSFVSPYVDEEDVNQPAYFLRHFLHFVLLSLHRPTYHYYAT
HGLELWRESRLLLDTDGHYTAMDCLERQSFQHYDAKLAPIYRPLGSHEIA
EIFQFYRSFQYSLTDYHFWLQGERFAFAETFVLDYFGLNPHRVLFYAVAQ
QLCNRQTEIFAAQLNRGYMNLPEFQEAFKCGAEKAMNPPSRCMINMCERP
HT*

BS21172.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:19:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG13283-PA 652 CG13283-PA 1..652 1..652 3496 100 Plus