BS21177.complete Sequence
860 bp assembled on 2011-01-18
GenBank Submission: KX803890
> BS21177.complete
GAAGTTATCAGTCGACATGAACGCCACATTAACTATATCGTTGCTCGCCA
GTTATATGCTTGTTATATATTCCGATTCTGTATCGGCAAATTATCTTTAC
GAGCAATGCGGTCTTATGCGAGAAGAGTTTTCAACATCTTTGGGTCCCTG
GACAGCTCTACTGCACACGGATGGTAGTATCTTTTGTGCCGGAACGCTGA
TAACTGATGTTTTCATACTGACTGCAGCGAGCTGTATTCGACCAAACGCC
GTTAAAGTTCGTTTGGGAGAGTTTGGCAGATATCCCAATGAATTGCCAGA
AGATCATTTGGTGCACTATTTTCTGATGTATCGGCTTTTCAACAATGAAT
CGCTAGCCAATAACATCGGTCTACTGAAATTAACCAAAAGAGTGCAAATT
ACAGACTACATTATGCCGGTTTGCATTGTCCTCAACCCGCAGAATCAGCA
GCTATCGACTATGCGATTCATCGGAAATGCCTGGATGGAAGACAGCAATG
TGTCCTTAACCAAGGAGTTACGACCCATTGTCATCCAGAGTAAGCCGAAG
ATGTGCACTAACCTTGACTTGTACACCCAGTTTTGTGCTGGCCACCAGGG
CAATTTGAGGTCATGCGACGGCCTCACCGGCTCGGCACTGATCCAGAATT
CTAGATATATGAACAAATATCGGCATATTCAGTTCGGCATCGCGACTGTG
AACGATATGGATTGCGAGGAGTCACAGGGTTATACCGATGTGTTGAAATT
CTACTGGTGGATCCAGGATGTGGTGTCACTGTTCAATCATTATTCAACAA
ATGAGAGCTATATTGTAAATGATTATATTAAGAAAAACTTCTGAAAGCTT
TCTAGACCAT
BS21177.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:00:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33460-RA | 828 | CG33460-PA | 1..828 | 17..844 | 4140 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33460-RA | 946 | CG33460-RA | 27..854 | 17..844 | 4140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15694698..15695140 | 402..844 | 2215 | 100 | Plus |
2R | 25286936 | 2R | 15694118..15694310 | 17..209 | 965 | 100 | Plus |
2R | 25286936 | 2R | 15694477..15694628 | 253..404 | 760 | 100 | Plus |
2R | 25286936 | 2R | 15694374..15694424 | 209..259 | 225 | 96.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:00:47 has no hits.
BS21177.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:46 Download gff for
BS21177.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33460-RA | 27..853 | 17..843 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:36 Download gff for
BS21177.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33460-RA | 27..853 | 17..843 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:16 Download gff for
BS21177.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33460-RA | 27..853 | 17..843 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:16 Download gff for
BS21177.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15694118..15694310 | 17..209 | 100 | -> | Plus |
2R | 15694375..15694417 | 210..252 | 100 | -> | Plus |
2R | 15694477..15694628 | 253..404 | 100 | -> | Plus |
2R | 15694701..15695139 | 405..843 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:36 Download gff for
BS21177.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11581623..11581815 | 17..209 | 100 | -> | Plus |
arm_2R | 11581880..11581922 | 210..252 | 100 | -> | Plus |
arm_2R | 11581982..11582133 | 253..404 | 100 | -> | Plus |
arm_2R | 11582206..11582644 | 405..843 | 100 | | Plus |
BS21177.pep Sequence
Translation from 16 to 843
> BS21177.pep
MNATLTISLLASYMLVIYSDSVSANYLYEQCGLMREEFSTSLGPWTALLH
TDGSIFCAGTLITDVFILTAASCIRPNAVKVRLGEFGRYPNELPEDHLVH
YFLMYRLFNNESLANNIGLLKLTKRVQITDYIMPVCIVLNPQNQQLSTMR
FIGNAWMEDSNVSLTKELRPIVIQSKPKMCTNLDLYTQFCAGHQGNLRSC
DGLTGSALIQNSRYMNKYRHIQFGIATVNDMDCEESQGYTDVLKFYWWIQ
DVVSLFNHYSTNESYIVNDYIKKNF*
BS21177.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:04:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33460-PA | 275 | CG33460-PA | 1..275 | 1..275 | 1457 | 100 | Plus |
CG14088-PB | 289 | CG14088-PB | 1..256 | 1..262 | 404 | 38 | Plus |
CG30090-PA | 291 | CG30090-PA | 21..282 | 23..258 | 289 | 31.6 | Plus |
CG18420-PA | 299 | CG18420-PA | 55..278 | 44..263 | 278 | 34.1 | Plus |
CG43335-PA | 281 | CG43335-PA | 54..279 | 44..256 | 262 | 30.5 | Plus |