BS21181.complete Sequence
1202 bp assembled on 2011-01-18
GenBank Submission: KX800756
> BS21181.complete
GAAGTTATCAGTCGACATGAAGTCGACTGTTTGGCTACCTTTGTTGACCC
TAATTTGGAGGAGTGCCAGTGCCAACCCGATATTGGGGCTTTTCGATCCC
GCCTGCCAAGTTGTTAGGGGAGAATGTCCCAATAAAAACATATCCTTCTG
GCTGTACTCGAATTCCACCCGGGAAAACCCCATTCTGCTGGATCCCCTTG
ACCTTAATCCGTGGAACTTCCAACCGCCACGTCCCCTAAAGATACTCATC
CATGGCTACACAGGTGACCGTGACTTTGCTCCCAACTCCTACATCCGTCC
CGTGCTCCTCGATCACGAAGATGTCTACGTGATCTCCATCGACTATGGAC
CACTTGTGCGATATCCCTGCTACATTCAGGCAGTTCAGAATCTTCCCCTA
GTGAGTCGATGCCTGGCGCAGTTAATCAACAACCTGGTCGATCGAGCTAT
TGTGGCAAATGACCAGATCCATCTGATAGGCTTCAGTTTGGGTGGTCAGG
TGGCGGGGCAGACGGCCAACTATGTGAAGAGAAAGATGAAGAGGATCACT
GGTCTAGATCCTGCGAAGCCCCTCTTTATATTGGGACCAGATTCAAGAAG
ATTGGACAAAGGAGATGCCGATTTTGTGGACGTCATCCACACGGATGTTT
TCGGTCGGGGATATCTGCGCGCTGCTGGTCATGTGGATTTCTACCCAAAC
TTTGGAGCCAAACAACCTGGCTGCATGGAGGAGAACATGCAAGATCCAAG
TAGCTGCAATCACGAGAGGGCTCCTCGCTTTTACGCCGAGTCCATCAATA
CCACTGTGGGTTTCTGGGCACGGCAGTGTTCCGGTTGGTTGCTCCAACTC
CTTACACTTTGTCCCACAACAGGAGCTCAAGCTCTACTGGGCTATCACGT
CTCGGATGAGTTGAGGGGCTCGTACTTCCTCCAGACTGCAAGTAAATCAC
CCTATGCCCTCGGAAAAATGCAGGATGTGGACAATAGACAGACCCTGGCC
AAGTTCCATTTGAATTTCGATCACAACGAAATCGACGATGACTACGAACC
ACAGTTGTTGGAGGCGTTCCTCGAGCTGGAGGCGGTGAAAGTGGTGGTCA
AAATGGATGAAAGCGAATTGGATAAGCGGTTGAACTGGATTTATAGGGAG
GAAGATGAGCCTTTATCCAGAAATTTAATTAAATAGAAGCTTTCTAGACC
AT
BS21181.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:00:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34447-RA | 1170 | CG34447-PA | 1..1170 | 17..1186 | 5835 | 99.9 | Plus |
| CG34447-RB | 1170 | CG34447-PB | 1..1170 | 17..1186 | 5835 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34447-RA | 1472 | CG34447-RA | 250..1419 | 17..1186 | 5835 | 99.9 | Plus |
| CG34447-RB | 1263 | CG34447-RB | 41..1210 | 17..1186 | 5835 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2418475..2419498 | 1186..163 | 5105 | 99.9 | Minus |
| 2L | 23513712 | 2L | 2419551..2419665 | 162..48 | 575 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:00:52 has no hits.
BS21181.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:47 Download gff for
BS21181.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34447-RA | 247..1410 | 17..1180 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:38 Download gff for
BS21181.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34447-RB | 41..1204 | 17..1180 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:18 Download gff for
BS21181.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34447-RB | 41..1204 | 17..1180 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:18 Download gff for
BS21181.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2418481..2419498 | 163..1180 | 99 | <- | Minus |
| 2L | 2419551..2419665 | 48..162 | 100 | <- | Minus |
| 2L | 2419734..2419764 | 17..47 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:38 Download gff for
BS21181.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2419551..2419665 | 48..162 | 100 | <- | Minus |
| arm_2L | 2419734..2419764 | 17..47 | 100 | | Minus |
| arm_2L | 2418481..2419498 | 163..1180 | 99 | <- | Minus |
BS21181.pep Sequence
Translation from 16 to 1185
> BS21181.pep
MKSTVWLPLLTLIWRSASANPILGLFDPACQVVRGECPNKNISFWLYSNS
TRENPILLDPLDLNPWNFQPPRPLKILIHGYTGDRDFAPNSYIRPVLLDH
EDVYVISIDYGPLVRYPCYIQAVQNLPLVSRCLAQLINNLVDRAIVANDQ
IHLIGFSLGGQVAGQTANYVKRKMKRITGLDPAKPLFILGPDSRRLDKGD
ADFVDVIHTDVFGRGYLRAAGHVDFYPNFGAKQPGCMEENMQDPSSCNHE
RAPRFYAESINTTVGFWARQCSGWLLQLLTLCPTTGAQALLGYHVSDELR
GSYFLQTASKSPYALGKMQDVDNRQTLAKFHLNFDHNEIDDDYEPQLLEA
FLELEAVKVVVKMDESELDKRLNWIYREEDEPLSRNLIK*
BS21181.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34447-PA | 389 | CG34447-PA | 1..389 | 1..389 | 2081 | 100 | Plus |
| CG34447-PB | 389 | CG34447-PB | 1..389 | 1..389 | 2081 | 100 | Plus |
| CG34448-PA | 344 | CG34448-PA | 5..329 | 3..322 | 730 | 47.7 | Plus |
| CG14034-PC | 338 | CG14034-PC | 17..330 | 22..335 | 621 | 41.8 | Plus |
| CG14034-PB | 338 | CG14034-PB | 17..330 | 22..335 | 621 | 41.8 | Plus |
