BS21186.complete Sequence
2135 bp assembled on 2011-02-17
GenBank Submission: KX800648
> BS21186.complete
GAAGTTATCAGTCGACATGGCTGATTTGGAAGCAGTCTTGGCTGATGTCA
GCTATTTAATGGCAATGGAAAAGTCTAAATGTACTCCAGCTGCGAGGGCA
AGCAAGAAATTAAATTTACCCGACCCGAGTGTTAGAAGTGTTATGTATAA
ATATTTGGAAAAAGAAGGCGAATTGAATTTTCATAAAATATTTAACGAAG
TTTTGGGCTATTTGTTGTTTAAAGACTTTTGTGAAAACGACTCAGAAGAA
CCTATACAGCAACTTAAGTTTTTTGAACAGATAAAACTCTTTGAAAAAAC
AGAATGTTATGATGAGCGGAAAAAAATGGCAAGGGATATTTATGACAATT
TTATAATGGAGGAAATGTTGTCCCACACCTATGAATACTCCAAACATGCT
GTTGCGAGTGTACAAAAATATTTATTAAAAAATGAGGTCCCGGTTGACTT
ATTTGAACCATACTTGGAAGAAATATTTACACAACTTAAAGGAAAGCCAT
TTAAAAAATTTTTAGAAAGCGATAAATTTACTAGGTTTTGCCAGTGGAAA
AATTTAGAACTGAACATACAACTAACTATGAACGATTTCAGCGTTCATAG
AATAATTGGACGGGGGGGTTTCGGAGAAGTATATGGATGCCGAAAAGCTG
ACACTGGAAAAATGTATGCTATGAAATGCTTGGACAAAAAACGGATTAAA
ATGAAACAAGGAGAAATGCTAGCTCTTAATGAAAGAAATATGCTGCAAGC
AGTCAGTACTGGAATTGATTGTCCGTTCATAGTGTGTATGACGTATGCCT
TTCATACGCCGGATAAGCTATGTTTTATATTAGATCTAATGAATGGTGGT
GATCTACATTACCATTTATCTCAACATGGTATTTTCAGTGAGGATGAAAT
GAAATTTTATGCAGCTGAGGTGATTTTGGGATTGGAACACATGCATAAAC
GTTGCATTGTGTACCGAGACTTAAAACCCGCCAACATACTGCTCGATGAA
AACGGACACATACGAATTTCTGATTTGGGATTGGCTTGCGACTTCTCAAA
AAAGAAACCGCATGCTTCAGTGGGAACTCATGGATACATGGCTCCAGAGG
TGCTATCTAAAGGAACATCATACGATTCGTGCGCAGATTGGTTTAGCTTC
GGATGCATGTTATATAAATTGCTTAAAGGTCATTCTCCATTTCGACAGCA
TAAAACAAAGGATAAGCTAGAAATTGACAAAATGACATTAACTATGAACG
TAGAACTTCCAGAATCGTTTTCTTTGGAACTAAAGAATTTGTTGGAAATG
TTACTTCAAAGGGACGTCTCTAAAAGGCTTGGGTGCATGGGAAATGGCGC
GGATGAAGTAAAAATGCACAATTTTTTCTGTGGAATTGATTGGCACCAGG
TTTACATACAAAAATATACTCCACCTTTAGTACCCCCTAGAGGGGAAGTA
AATGCCGCAGATGCCTTCGATATTGGATCATTTGATGAGGAAGATACCAA
GGGCATAAAACTAAACGACGCCGATCAAGATCTATATAAAATGTTTTCGT
TGACAATATCTGAAAGGTGGCAACAGGAAGTTTCTGAAACAGTATTTGAT
ACAGTCAACACTGAGACAGATAAACTAGAACAAAAAAGAAAATTGAAGCA
AAAGCAGCACTTCGATGCAGATGAAAAGGAATCCGATTGTATATTACATG
GCTACATAAAAAAGCTTGGGGGCTCTTTTGCATCTTTATGGCAAACAAAA
TATGCCAAGCTATATCCAAATAGGCTGGAGCTACATTCGGAAAGTGGAAA
TAATAAACCAGAACTAATTTTTATGGACCAAGTAGAAGATATATCATCGG
ATTTCATTCTGCACAAAAACGAGAATTGCATTCAAATTCGCATTAATGAT
GGAACCCGTGATGGCAGAATCATTTTGACAAACTCAGATGAAATAGGATT
AAAAGAATGGTCATCTTCCCTAAGATCGGCACACAAAATTTCTCAAGACC
TCTTGGGGTCAATGGCTAAAAAAGCTGGAAAAATATATGGCAGTGAAAGG
GATGTCAACAAATCTATGTATATTTTTGGTGGGAACTGCTCAACGAAAAC
TTCTAACGGGTCTAATTAAAAGCTTTCTAGACCAT
BS21186.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:01:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gprk1-RC | 2103 | CG40129-PC | 1..2103 | 17..2119 | 10500 | 100 | Plus |
| Gprk1-RA | 2103 | CG40129-PA | 1..2103 | 17..2119 | 10500 | 100 | Plus |
| Gprk1-RB | 2103 | CG40129-PB | 1..2103 | 17..2119 | 10500 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:01:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gprk1-RC | 2519 | CG40129-RC | 179..2281 | 17..2119 | 10500 | 100 | Plus |
| Gprk1-RA | 2377 | CG40129-RA | 179..2281 | 17..2119 | 10500 | 100 | Plus |
| Gprk1-RB | 2292 | CG40129-RB | 94..2196 | 17..2119 | 10500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:01:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 4378369..4378697 | 1246..918 | 1645 | 100 | Minus |
| 2R | 25286936 | 2R | 4350547..4350768 | 1568..1347 | 1110 | 100 | Minus |
| 2R | 25286936 | 2R | 4336376..4336585 | 1774..1565 | 1050 | 100 | Minus |
| 2R | 25286936 | 2R | 4378964..4379155 | 763..572 | 960 | 100 | Minus |
| 2R | 25286936 | 2R | 4322533..4322715 | 2119..1937 | 915 | 100 | Minus |
| 2R | 25286936 | 2R | 4322775..4322941 | 1937..1771 | 835 | 100 | Minus |
| 2R | 25286936 | 2R | 4378747..4378904 | 921..764 | 775 | 99.4 | Minus |
| 2R | 25286936 | 2R | 4470770..4470882 | 129..17 | 565 | 100 | Minus |
| 2R | 25286936 | 2R | 4458153..4458257 | 383..279 | 525 | 100 | Minus |
| 2R | 25286936 | 2R | 4664929..4665033 | 383..279 | 525 | 100 | Minus |
| 2R | 25286936 | 2R | 4351118..4351219 | 1347..1246 | 510 | 100 | Minus |
| 2R | 25286936 | 2R | 4458440..4458519 | 207..128 | 400 | 100 | Minus |
| 2R | 25286936 | 2R | 4665216..4665295 | 207..128 | 400 | 100 | Minus |
| 2R | 25286936 | 2R | 4458023..4458097 | 457..383 | 375 | 100 | Minus |
| 2R | 25286936 | 2R | 4458307..4458381 | 280..206 | 375 | 100 | Minus |
| 2R | 25286936 | 2R | 4664799..4664873 | 457..383 | 375 | 100 | Minus |
| 2R | 25286936 | 2R | 4665083..4665157 | 280..206 | 375 | 100 | Minus |
| 2R | 25286936 | 2R | 4427936..4427997 | 519..458 | 310 | 100 | Minus |
| 2R | 25286936 | 2R | 4407973..4408034 | 579..518 | 280 | 96.8 | Minus |
| 2R | 25286936 | 2R | 4449379..4449451 | 457..384 | 230 | 90.5 | Minus |
Blast to na_te.dros performed 2014-11-27 13:01:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Penelope | 4158 | Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). | 2066..2115 | 450..501 | 129 | 75 | Plus |
BS21186.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-17 13:27:07 Download gff for
BS21186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gprk1-RA | 187..2287 | 17..2117 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:47:53 Download gff for
BS21186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gprk1-RB | 94..2194 | 17..2117 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:09:33 Download gff for
BS21186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gprk1-RB | 94..2194 | 17..2117 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:09:33 Download gff for
BS21186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 4378369..4378695 | 920..1246 | 100 | <- | Minus |
| 2R | 4378749..4378904 | 764..919 | 99 | <- | Minus |
| 2R | 4378964..4379155 | 572..763 | 100 | <- | Minus |
| 2R | 4407981..4408032 | 520..571 | 100 | <- | Minus |
| 2R | 4427936..4427997 | 458..519 | 100 | <- | Minus |
| 2R | 4458023..4458097 | 383..457 | 100 | <- | Minus |
| 2R | 4458154..4458255 | 281..382 | 100 | <- | Minus |
| 2R | 4458307..4458380 | 207..280 | 100 | <- | Minus |
| 2R | 4458441..4458517 | 130..206 | 100 | <- | Minus |
| 2R | 4470770..4470882 | 17..129 | 100 | | Minus |
| 2R | 4351118..4351218 | 1247..1347 | 100 | <- | Minus |
| 2R | 4322535..4322715 | 1937..2117 | 100 | <- | Minus |
| 2R | 4322776..4322938 | 1774..1936 | 100 | <- | Minus |
| 2R | 4336377..4336583 | 1567..1773 | 100 | <- | Minus |
| 2R | 4350549..4350767 | 1348..1566 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:47:53 Download gff for
BS21186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 238054..238272 | 1348..1566 | 100 | <- | Minus |
| arm_2R | 238623..238723 | 1247..1347 | 100 | <- | Minus |
| arm_2R | 210040..210220 | 1937..2117 | 100 | <- | Minus |
| arm_2R | 210281..210443 | 1774..1936 | 100 | <- | Minus |
| arm_2R | 223882..224088 | 1567..1773 | 100 | <- | Minus |
| arm_2R | 265874..266200 | 920..1246 | 100 | <- | Minus |
| arm_2R | 266254..266409 | 764..919 | 99 | <- | Minus |
| arm_2R | 266469..266660 | 572..763 | 100 | <- | Minus |
| arm_2R | 295486..295537 | 520..571 | 100 | <- | Minus |
| arm_2R | 315441..315502 | 458..519 | 100 | <- | Minus |
| arm_2R | 345528..345602 | 383..457 | 100 | <- | Minus |
| arm_2R | 345659..345760 | 281..382 | 100 | <- | Minus |
| arm_2R | 345812..345885 | 207..280 | 100 | <- | Minus |
| arm_2R | 345946..346022 | 130..206 | 100 | <- | Minus |
| arm_2R | 358275..358387 | 17..129 | 100 | | Minus |
BS21186.pep Sequence
Translation from 16 to 2118
> BS21186.pep
MADLEAVLADVSYLMAMEKSKCTPAARASKKLNLPDPSVRSVMYKYLEKE
GELNFHKIFNEVLGYLLFKDFCENDSEEPIQQLKFFEQIKLFEKTECYDE
RKKMARDIYDNFIMEEMLSHTYEYSKHAVASVQKYLLKNEVPVDLFEPYL
EEIFTQLKGKPFKKFLESDKFTRFCQWKNLELNIQLTMNDFSVHRIIGRG
GFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGEMLALNERNMLQAVSTGI
DCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGIFSEDEMKFYAA
EVILGLEHMHKRCIVYRDLKPANILLDENGHIRISDLGLACDFSKKKPHA
SVGTHGYMAPEVLSKGTSYDSCADWFSFGCMLYKLLKGHSPFRQHKTKDK
LEIDKMTLTMNVELPESFSLELKNLLEMLLQRDVSKRLGCMGNGADEVKM
HNFFCGIDWHQVYIQKYTPPLVPPRGEVNAADAFDIGSFDEEDTKGIKLN
DADQDLYKMFSLTISERWQQEVSETVFDTVNTETDKLEQKRKLKQKQHFD
ADEKESDCILHGYIKKLGGSFASLWQTKYAKLYPNRLELHSESGNNKPEL
IFMDQVEDISSDFILHKNENCIQIRINDGTRDGRIILTNSDEIGLKEWSS
SLRSAHKISQDLLGSMAKKAGKIYGSERDVNKSMYIFGGNCSTKTSNGSN
*
BS21186.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:24:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gprk1-PC | 700 | CG40129-PC | 1..700 | 1..700 | 3709 | 100 | Plus |
| Gprk1-PA | 700 | CG40129-PA | 1..700 | 1..700 | 3709 | 100 | Plus |
| Gprk1-PB | 700 | CG40129-PB | 1..700 | 1..700 | 3709 | 100 | Plus |
| Gprk2-PB | 714 | CG17998-PB | 263..646 | 144..525 | 753 | 41.3 | Plus |
| Gprk2-PA | 714 | CG17998-PA | 263..646 | 144..525 | 753 | 41.3 | Plus |
