BS21302.complete Sequence
1205 bp assembled on 2011-01-31
GenBank Submission: KX803996
> BS21302.complete
GAAGTTATCAGTCGACATGCAGAAGAAGGTAGCGCCAGAGCGCCGTCCAT
ACTGTGATCCTCGGCTGCAGGATGACAAGCTGAGGAGGAAACGAACTCTC
CATCTGCCCAGAGTGTCGCAGGCTCAGAAGAAGGGCGAAAAGCGCCAGCT
GAACGACTGCCCCTTCTACAACCTGACTTATGGCTTTGACCAACTGCCAC
TGGATCCTGTCAAGGAGTTCCTGCAGGAGAAGATATCTCACATGCAGACA
GACAAAATAGTGGGACATTGCAATCGGGAGTTTGATTTCCACCGATACGA
TTTGGATAACGTGAAGGATGAGTATGATGAGTGCGATGATGACAGCTTGC
AGGAGCTGCAACTGGAGGATATTATCATGCCCGAGCAGTTCGAGATGCTG
CGCGATGCCAAGGATCATTTATACAACTTTGATTCCACTGCCTGTAATCA
ATTTCCCTGGATTGACAAATGGATGACTGGCGTGCGTCCCAGTGAGCAGG
AGATCTATGAAATGACCAGCCACCTCCTGGAAATCTACTGCAATCGCAGG
GTGCGCATCTTCTATCCGGGCTGCGGAACCAGTTCCTCCTTGTGGACAAA
CCAGCTGAGGCGCCAGCACGGATCCCCTTCGGAGCTGATTGGAGCCTATC
GAACTCCCTCTGCCCGCCACATGCGGGTCAACAACATGAGAGGACCTCCC
AAGAAGGAAAAGTTCACGGCCGGCGATCATTATGCCTTTCGAACGCCGCA
GGAATGTCGCAACGAACTGATGAGAGTTGGGAAAATAATTGATGAGCTAA
TCGAGCCAGTGCTGAAAGCAGCAGAGCACAAAATTGGTCATGGACTCACA
AAATATCCCGATCCGCCCAGTTGTAAGGACAACACTAATCGAATCCTTAG
GTCGGCAGGTATATTGGTGGGAAAGAAAAAGAATTGCTATGTCGGCAAGT
GTCGCATACATCGTAAGGACTTTGCCACAAATGAGGAGTTTCTGCGCTGT
CTCAAAAGGATGGAAGCAACCCACTTTCCGTACATGCAACCCTTGCAACC
GGTGGATCCTGATGACCAAAAGATCAAAATGTTGGCTAAATACCGAGTAG
AGCTGGCAAGAGCGGAAAAGCTTTTTACCCTGAAGATACAGAAGCGATAC
CAGTGTCTGCTGAAAAGTGTGAGTTATGATGAGAGATAGAAGCTTTCTAG
ACCAT
BS21302.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:32:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17150-RE | 1173 | CG17150-PE | 1..1173 | 17..1189 | 5865 | 100 | Plus |
| CG17150-RD | 13158 | CG17150-PD | 1..1152 | 17..1168 | 5760 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:32:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17150-RE | 1656 | CG17150-RE | 152..1329 | 12..1189 | 5875 | 99.9 | Plus |
| CG17150-RD | 13807 | CG17150-RD | 187..1343 | 12..1168 | 5770 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:32:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4863408..4863678 | 482..752 | 1355 | 100 | Plus |
| 3L | 28110227 | 3L | 4861455..4861679 | 12..236 | 1110 | 99.6 | Plus |
| 3L | 28110227 | 3L | 4861737..4861940 | 237..440 | 1020 | 100 | Plus |
| 3L | 28110227 | 3L | 4863731..4863899 | 752..920 | 845 | 100 | Plus |
| 3L | 28110227 | 3L | 4864120..4864288 | 1021..1189 | 845 | 100 | Plus |
| 3L | 28110227 | 3L | 4863958..4864059 | 919..1020 | 510 | 100 | Plus |
| 3L | 28110227 | 3L | 4863291..4863333 | 440..482 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:32:18 has no hits.
BS21302.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:31:47 Download gff for
BS21302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17150-RE | 157..1329 | 17..1189 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:01:22 Download gff for
BS21302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17150-RE | 157..1329 | 17..1189 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:03:50 Download gff for
BS21302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17150-RE | 157..1329 | 17..1189 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:03:50 Download gff for
BS21302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4861460..4861679 | 17..236 | 100 | -> | Plus |
| 3L | 4861737..4861940 | 237..440 | 100 | -> | Plus |
| 3L | 4863292..4863333 | 441..482 | 100 | -> | Plus |
| 3L | 4863409..4863678 | 483..752 | 100 | -> | Plus |
| 3L | 4863732..4863898 | 753..919 | 100 | -> | Plus |
| 3L | 4863959..4864059 | 920..1020 | 100 | -> | Plus |
| 3L | 4864120..4864288 | 1021..1189 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:01:22 Download gff for
BS21302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4861460..4861679 | 17..236 | 100 | -> | Plus |
| arm_3L | 4861737..4861940 | 237..440 | 100 | -> | Plus |
| arm_3L | 4863292..4863333 | 441..482 | 100 | -> | Plus |
| arm_3L | 4863409..4863678 | 483..752 | 100 | -> | Plus |
| arm_3L | 4863732..4863898 | 753..919 | 100 | -> | Plus |
| arm_3L | 4863959..4864059 | 920..1020 | 100 | -> | Plus |
| arm_3L | 4864120..4864288 | 1021..1189 | 100 | | Plus |
BS21302.pep Sequence
Translation from 16 to 1188
> BS21302.pep
MQKKVAPERRPYCDPRLQDDKLRRKRTLHLPRVSQAQKKGEKRQLNDCPF
YNLTYGFDQLPLDPVKEFLQEKISHMQTDKIVGHCNREFDFHRYDLDNVK
DEYDECDDDSLQELQLEDIIMPEQFEMLRDAKDHLYNFDSTACNQFPWID
KWMTGVRPSEQEIYEMTSHLLEIYCNRRVRIFYPGCGTSSSLWTNQLRRQ
HGSPSELIGAYRTPSARHMRVNNMRGPPKKEKFTAGDHYAFRTPQECRNE
LMRVGKIIDELIEPVLKAAEHKIGHGLTKYPDPPSCKDNTNRILRSAGIL
VGKKKNCYVGKCRIHRKDFATNEEFLRCLKRMEATHFPYMQPLQPVDPDD
QKIKMLAKYRVELARAEKLFTLKIQKRYQCLLKSVSYDER*
BS21302.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:04:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17150-PE | 390 | CG17150-PE | 1..390 | 1..390 | 2116 | 100 | Plus |
| CG17150-PD | 4385 | CG17150-PD | 1..386 | 1..386 | 2090 | 99.7 | Plus |
