BS21313.complete Sequence
287 bp assembled on 2011-01-18
GenBank Submission: KX806001
> BS21313.complete
GAAGTTATCAGTCGACATGGTGTCGTTCGAGGAAGCCACTGAACTCGCCA
ACAAGTTCACCAAGAAGCCCACGGATGCCGAGTTCTTGGAATTCTACGGT
CTCTTCAAGCAGGCCACCGTTGGCGATGTGAACATCGAGAAGCCCGGCGC
TCTGGCTCTCAAGGACAAGGCCAAGTACGAGGCCTGGAGCTCCAACAAGG
GTCTCTCCAAGGAGGCTGCCAAGGAGGCCTACGTAAAGGTGTACGAGAAG
TACGCCCCCAAGTACGCCTAAAAGCTTTCTAGACCAT
BS21313.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:23:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8628-RA | 255 | CG8628-PA | 1..255 | 17..271 | 1275 | 100 | Plus |
| CG8628-RB | 255 | CG8628-PB | 1..255 | 17..271 | 1275 | 100 | Plus |
| CG8629-RA | 255 | CG8629-PA | 13..255 | 29..271 | 825 | 89.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:23:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8628-RA | 429 | CG8628-RA | 57..313 | 15..271 | 1285 | 100 | Plus |
| CG8628-RB | 408 | CG8628-RB | 36..292 | 15..271 | 1285 | 100 | Plus |
| CG8629-RA | 352 | CG8629-RA | 48..290 | 29..271 | 825 | 89.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:23:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7131143..7131389 | 25..271 | 1235 | 100 | Plus |
| 3L | 28110227 | 3L | 7127975..7128217 | 271..29 | 825 | 89.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:23:47 has no hits.
BS21313.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:41 Download gff for
BS21313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8628-RA | 59..311 | 17..269 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:34 Download gff for
BS21313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8628-RB | 38..290 | 17..269 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:19 Download gff for
BS21313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8628-RB | 38..290 | 17..269 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:19 Download gff for
BS21313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7131134..7131387 | 18..269 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:34 Download gff for
BS21313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7124234..7124487 | 18..269 | 98 | | Plus |
BS21313.pep Sequence
Translation from 16 to 270
> BS21313.pep
MVSFEEATELANKFTKKPTDAEFLEFYGLFKQATVGDVNIEKPGALALKD
KAKYEAWSSNKGLSKEAAKEAYVKVYEKYAPKYA*
BS21313.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:01:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8628-PA | 84 | CG8628-PA | 1..84 | 1..84 | 430 | 100 | Plus |
| CG8628-PB | 84 | CG8628-PB | 1..84 | 1..84 | 430 | 100 | Plus |
| CG8629-PA | 84 | CG8629-PA | 1..84 | 1..84 | 366 | 83.3 | Plus |
| CG15829-PB | 82 | CG15829-PB | 1..81 | 1..83 | 219 | 53 | Plus |
| CG15829-PA | 82 | CG15829-PA | 1..81 | 1..83 | 219 | 53 | Plus |
