BS21325.complete Sequence
653 bp assembled on 2011-01-18
GenBank Submission: KX804746
> BS21325.complete
GAAGTTATCAGTCGACATGATCTCCAGCAAGAAATCGCTGTTGATATGGG
CCTATGCTATAGGATGCTTTGATCTGATCAGCGCATTGCTTTTTTCCATG
GTCAGTTTGAAGACAATTTGCGAACACCTAAGTTGGCTAACAATTTTTGC
CGCTATTTTTGGCCTCTTTTGGATAACAATGATTGTGATGCTGCTGGTTG
GCATTCATGGGCGCCATCCTAGTTGTGTTCGTGCCTGGATTATCTTCTCC
TGCGTGGGAATCATGGTCGAGATGTGCCTGGTGTTGTATGCCGTTTTCAA
CGAGAGCTCCTTCCAAATGGGTCTGGTCAAAAATGGACTATTACTCATGG
TGGGATTGATTGTGGAGTGCATTTTTCTATACATCGTTCAACGGTTCTAC
GTGACTTTGGCCTTTTGCCAAGCCTGTCATAAGGCTATAGCCACAAAAAT
AGCACAACAGGAAGCTTGTATGGATTATGAAAGAGAACACAGTCACCAAA
GGCATCATTTTAATTATGGCGAAACCAAAAGACCTATTCAAAACCAAAAT
AGCAGGGGAAAAATAGTTAAAAACTCTCCGTCACAACCAATGAAGATGGG
TTTTTTCAGACCTTCAGACAGCAGCTCAACAACGTAAAAGCTTTCTAGAC
CAT
BS21325.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:21:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34238-RA | 621 | CG34238-PA | 1..621 | 17..637 | 3105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34238-RA | 754 | CG34238-RA | 65..692 | 12..639 | 3125 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10627098..10627377 | 360..639 | 1400 | 100 | Plus |
3L | 28110227 | 3L | 10626894..10627042 | 211..359 | 745 | 100 | Plus |
3L | 28110227 | 3L | 10626563..10626683 | 12..132 | 575 | 98.3 | Plus |
3L | 28110227 | 3L | 10626746..10626829 | 128..211 | 420 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 16:21:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 5928..5959 | 502..471 | 106 | 81.2 | Minus |
BS21325.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:23 Download gff for
BS21325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34238-RA | 17..635 | 17..635 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:37 Download gff for
BS21325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34238-RA | 70..688 | 17..635 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:22 Download gff for
BS21325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34238-RA | 70..688 | 17..635 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:22 Download gff for
BS21325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10626746..10626829 | 128..211 | 100 | -> | Plus |
3L | 10626895..10627042 | 212..359 | 100 | -> | Plus |
3L | 10627098..10627373 | 360..635 | 100 | | Plus |
3L | 10626568..10626678 | 17..127 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:37 Download gff for
BS21325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10619668..10619778 | 17..127 | 100 | -> | Plus |
arm_3L | 10619846..10619929 | 128..211 | 100 | -> | Plus |
arm_3L | 10619995..10620142 | 212..359 | 100 | -> | Plus |
arm_3L | 10620198..10620473 | 360..635 | 100 | | Plus |
BS21325.pep Sequence
Translation from 16 to 636
> BS21325.pep
MISSKKSLLIWAYAIGCFDLISALLFSMVSLKTICEHLSWLTIFAAIFGL
FWITMIVMLLVGIHGRHPSCVRAWIIFSCVGIMVEMCLVLYAVFNESSFQ
MGLVKNGLLLMVGLIVECIFLYIVQRFYVTLAFCQACHKAIATKIAQQEA
CMDYEREHSHQRHHFNYGETKRPIQNQNSRGKIVKNSPSQPMKMGFFRPS
DSSSTT*
BS21325.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34238-PA | 206 | CG34238-PA | 1..206 | 1..206 | 1084 | 100 | Plus |
CG14151-PA | 196 | CG14151-PA | 13..152 | 12..151 | 229 | 34.3 | Plus |
CG42535-PA | 187 | CG42535-PA | 39..154 | 13..128 | 186 | 27.6 | Plus |
CG42536-PA | 184 | CG42536-PA | 14..135 | 7..128 | 154 | 26.2 | Plus |