Clone BS21326 Report

Search the DGRC for BS21326

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:213
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG34244-RA
Protein status:BS21326.pep: full length peptide match
Sequenced Size:371

Clone Sequence Records

BS21326.complete Sequence

371 bp assembled on 2011-01-18

GenBank Submission: KX800262

> BS21326.complete
GAAGTTATCAGTCGACATGAAGCTCTTGTCTTTATTCCTTCTGGCTTACA
TCGCTTATACTGCCGCTAAAGTGGTTCCCGCTTCAAACAGCAATAGCCTG
AGCATTGACCAGCACGGCAAAAGGGTTTATGCGGATGTGACCGAGGATAA
TTGCGACTATTCTTGTCCCGAAAAGGATCCTTCGGTCTGTGCCACCAATG
GACAATGCATTCTGAAGTTTGAGAGCCGCTGTGCCATGTCAGCCTACAAC
TGCCGTAATCCCCAGAAAATGTTTAAACCCGTGGAAGACCATCGTTGCAC
GCAGGACTGGCAGCCTCTTTGCATGGAGTCAGATCTCAGGGAGTTCGGCT
TGTGAAAGCTTTCTAGACCAT

BS21326.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG34244-RB 339 CG34244-PB 1..339 17..355 1680 99.7 Plus
CG34244-RA 339 CG34244-PA 1..339 17..355 1680 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG34244-RB 829 CG34244-RB 302..641 16..355 1685 99.7 Plus
CG34244-RA 478 CG34244-RA 81..420 16..355 1685 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:03:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14235241..14235552 355..44 1560 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:03:07 has no hits.

BS21326.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:04 Download gff for BS21326.complete
Subject Subject Range Query Range Percent Splice Strand
CG34244-RA 82..419 17..354 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:38 Download gff for BS21326.complete
Subject Subject Range Query Range Percent Splice Strand
CG34244-RA 82..419 17..354 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:11 Download gff for BS21326.complete
Subject Subject Range Query Range Percent Splice Strand
CG34244-RA 82..419 17..354 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:11 Download gff for BS21326.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14235242..14235551 45..354 100 <- Minus
3L 14235612..14235639 17..44 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:38 Download gff for BS21326.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14228342..14228651 45..354 100 <- Minus
arm_3L 14228712..14228739 17..44 96   Minus

BS21326.pep Sequence

Translation from 16 to 354

> BS21326.pep
MKLLSLFLLAYIAYTAAKVVPASNSNSLSIDQHGKRVYADVTEDNCDYSC
PEKDPSVCATNGQCILKFESRCAMSAYNCRNPQKMFKPVEDHRCTQDWQP
LCMESDLREFGL*

BS21326.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG34244-PB 112 CG34244-PB 1..112 1..112 609 100 Plus
CG34244-PA 112 CG34244-PA 1..112 1..112 609 100 Plus