Clone BS21330 Report

Search the DGRC for BS21330

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:213
Well:30
Vector:pDNR-Dual
Associated Gene/TranscriptCG34199-RA
Protein status:BS21330.pep: gold
Sequenced Size:611

Clone Sequence Records

BS21330.complete Sequence

611 bp assembled on 2011-01-18

GenBank Submission: KX804803

> BS21330.complete
GAAGTTATCAGTCGACATGGTGACAAAGTTGCTTCTACTGCTGCCATTTG
TGGCCATTGTACAAGCTGAAGTGGATTTTACCGGTGGACGTATAGCACCT
TATGCACCAACTGGTTGGCATCCGCAGATTCCATTCAACTTACCCAACGA
GTATGTGCCTGCTATCCGATCAAGTCAGGGAGTAGAAATCACAAAGGCAC
GAGTGGACCAGTTCGATCCAGTGGAAAAGCCCCAGCCAAATTATTTGCCT
CCAAATCAACTGGATATACCCGAGGAAGAGATTTTGCCCACCTCACGACC
GTCCAACAAGTACGGTCCGGCAGATCCGAAATTTAAAATCATTTATCCTG
ATGATGAGGAGCCAGTTACTGCAAAAAATATCGTAGACAATCAGCAGCCC
AAAATCAGAGAGGGACGTTACTTCGTCATTTCGCAGGACAATAAACTACA
AAGAGTTTCTTTCAGCTCCCAGCAAAACGCAGATGCAGATGCAGATGATT
TTACGGCTCAGTTGACTTACTCCACTGTGGGGCAACTCAAGGATCCTGTG
TATCGATACAACAGACAGGGACAACTGGAGCGGGTCCTGAAGTAGAAGCT
TTCTAGACCAT

BS21330.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:03:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG34199-RA 579 CG34199-PA 1..579 17..595 2895 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:03:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG34199-RA 694 CG34199-RA 32..610 17..595 2895 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:03:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20287692..20288262 25..595 2855 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:03:22 has no hits.

BS21330.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:06 Download gff for BS21330.complete
Subject Subject Range Query Range Percent Splice Strand
CG34199-RA 13..591 17..595 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:44 Download gff for BS21330.complete
Subject Subject Range Query Range Percent Splice Strand
CG34199-RA 32..610 17..595 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:17 Download gff for BS21330.complete
Subject Subject Range Query Range Percent Splice Strand
CG34199-RA 32..610 17..595 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:17 Download gff for BS21330.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20287692..20288262 25..595 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:44 Download gff for BS21330.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16175197..16175767 25..595 100   Plus

BS21330.pep Sequence

Translation from 16 to 594

> BS21330.pep
MVTKLLLLLPFVAIVQAEVDFTGGRIAPYAPTGWHPQIPFNLPNEYVPAI
RSSQGVEITKARVDQFDPVEKPQPNYLPPNQLDIPEEEILPTSRPSNKYG
PADPKFKIIYPDDEEPVTAKNIVDNQQPKIREGRYFVISQDNKLQRVSFS
SQQNADADADDFTAQLTYSTVGQLKDPVYRYNRQGQLERVLK*

BS21330.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG34199-PA 192 CG34199-PA 1..192 1..192 1007 100 Plus