BS21332.complete Sequence
1946 bp assembled on 2011-02-17
GenBank Submission: KX805907
> BS21332.complete
GAAGTTATCAGTCGACATGATCGCGATCAGCGATAATTCGCTTGGGCAGC
GATTAAAACGCCTCCAGCTGGCATTTCTCCTCATCGCTCTTTGGGATTCT
ACGAGGGCACTGACGGTCGACAATCAATTGGTATCCGCAAGAAATGACTG
CTTCGAGCGGATTGCACTGGAGGCGATGCTGCCATTTGAGAAGACCTTCC
GCACCGAAGACACCAACTCGCTGAAGATGTGCAAGGAGAAGTGCCTGCAG
GCGGGCGAGAAGTGTCAGGCCATCTCGTTCGGTGTTCATCGACGCGGAAA
CGGCACTTGTCAGTTGTCATCGGAGCAGTACGGCTCGGGGGGCGGCGGGC
GTCCGGGGGGCGTGATTTTCGATCCCGACTTTGATCTGTACACGCGCAAG
ACGAACTGCTTCGACTTGAGCGACAACTCGATTGCCGCTGGTCCGCAGCC
CGTGCCCGGTCCCAGTCCCATTTCACCCGGACCGACGCCACTGGATCTGC
CGAACAGGCCCTTGGATGTGGGCAATACGCCAGTGCTGGTGGTCAACCCC
ACGCCACACACTTCGGGGAGTCCACCGCCTCCGTTGGGACCGTCCCTACC
GCCACCTGGCGTTGGCGATCGGCTGTACTTCTCGCACGATCTGTATCCGC
TCTACAAGTATCCCACGCTTTACGAGAGCAACTATCCGTCGCCCAACGAG
GAGGCCTACATTCCCGGCGGCTATGCAGCCAATGCCCCCGAGGTGGACGA
GCGGTATCGTCCCCACTACGGACCCATAGAACCAGCGGAGGATGAAGGTA
TTCGGCCCACGCCACATAGCCCTCCAAGACCCATCTTTGGATTGGGCTAC
GGGAATGGTTATAGCTACGGATCCCCGGAGAGATATACACCGCCGACAGG
GAGGCCATCGAGTGGTTCTTCGGAGGAGCGACCCAGCTATGCCGCAAGGC
CACCTCGTCCGACAGCCGATCGTCCGGAATATCCGCCCGGACCTCCGCGT
CCTACGGCCGATCGTCCGGAGTATCCACCGCGCCCCTACGAAGGCTCCAC
ACCGCCCTCCTATGGACCACGGCCGAGTCCCAGCTACGATCCCGATCGCG
AACCACGGCCGGACTACACCAATCGACCGGATCCGCCATCCCTATCGCCG
CAAGTAGGTTACGGAATGAATGGCCCATCGGCACGTCCACCACCAACCTC
TTACGACGGTCCACCTCCACCACGAGATGAGTACGTTCGGAGGAACGGCA
GTGCCATGAGGCCTGGAGACGGATACGGTGGTTACGACGATGACAAAACG
ATTGCTACATACTTCAATCCGGATGACTATATGCAAGGGAATAACAACCG
ACCAATGCCCAGCGATAGAGATAGAGACCGGAATAGGGACAGACTTGGTT
ATCCCATGGATGAAATGAAAGGCGATGTGGCCTGGCGTCACTACACCGTG
TCCGGAAAGCCCTGCCGCCGGAGCAGTCCCTGCGCCAAGAATCTGATCAC
GGGCTTCTACTCCTGCGAGACGGATGCCTCCGAGGTCGGCTCCTGGGACT
ACTGCTGCAAGGCGGACCACCCGTGCGGCTACAGCAAGGGATTCGATTAT
CCATGGTGCTTTGTGGGCGATGAGTCGGACCAGTGGCGCAAGTGCAGCGA
TCGGTACTTCCCCGGAAAGAACGGCACCCAGCCGACCCACTCGCATCTGG
GACTGCCCAGTGCCAAGGAGAAACAGAAACATCCACATCCACATCACTCC
CAGCCGGCGACGGCGGCCAGCAGCGAATACAGCCAGCACCCACCTCGACC
CGGCGGACTGCAGAGCCTCAGTGACTTCGCCGCCGCGCGTCTGTGGCCCG
TGACCTACCTGTACAGTGAGGGCCCGCCCAATGCCACCGAGTTCAGCAAC
TTCGTCGACTGCAACAAGGAGTCGTGCTAGAAGCTTTCTAGACCAT
BS21332.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:45:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42326-RE | 4131 | CG42326-PE | 1..1405 | 17..1421 | 7025 | 100 | Plus |
| CG42326-RE | 4131 | CG42326-PE | 3622..4131 | 1421..1930 | 2550 | 100 | Plus |
| CG42326-RD | 2859 | CG42326-PD | 2350..2859 | 1421..1930 | 2550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:45:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42326-RE | 5244 | CG42326-RE | 806..2211 | 16..1421 | 7030 | 100 | Plus |
| CG42326-RE | 5244 | CG42326-RE | 4428..4937 | 1421..1930 | 2550 | 100 | Plus |
| CG42326-RD | 3400 | CG42326-RD | 2584..3093 | 1421..1930 | 2550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:45:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8581023..8582087 | 1346..282 | 5325 | 100 | Minus |
| 2R | 25286936 | 2R | 8573675..8574000 | 1930..1605 | 1630 | 100 | Minus |
| 2R | 25286936 | 2R | 8574075..8574264 | 1607..1418 | 950 | 100 | Minus |
| 2R | 25286936 | 2R | 8582184..8582320 | 282..146 | 685 | 100 | Minus |
| 2R | 25286936 | 2R | 8583495..8583625 | 146..16 | 655 | 100 | Minus |
| 2R | 25286936 | 2R | 8580835..8580910 | 1422..1347 | 380 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:45:10 has no hits.
BS21332.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-17 10:42:03 Download gff for
BS21332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42326-RC | 19..1932 | 17..1930 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:21:54 Download gff for
BS21332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42326-RE | 807..2212 | 17..1420 | 99 | <- | Plus |
| CG42326-RE | 4426..4937 | 1421..1930 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:19 Download gff for
BS21332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42326-RE | 4426..4937 | 1421..1930 | 99 | | Plus |
| CG42326-RE | 807..2212 | 17..1420 | 99 | <- | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:19 Download gff for
BS21332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8573675..8573999 | 1606..1930 | 100 | <- | Minus |
| 2R | 8574077..8574260 | 1422..1605 | 100 | <- | Minus |
| 2R | 8580836..8580910 | 1347..1421 | 100 | <- | Minus |
| 2R | 8581023..8582086 | 283..1346 | 100 | <- | Minus |
| 2R | 8582184..8582319 | 147..282 | 100 | <- | Minus |
| 2R | 8583495..8583624 | 17..146 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:21:54 Download gff for
BS21332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4461180..4461504 | 1606..1930 | 100 | <- | Minus |
| arm_2R | 4461582..4461765 | 1422..1605 | 100 | <- | Minus |
| arm_2R | 4468341..4468415 | 1347..1421 | 100 | <- | Minus |
| arm_2R | 4468528..4469591 | 283..1346 | 100 | <- | Minus |
| arm_2R | 4469689..4469824 | 147..282 | 100 | <- | Minus |
| arm_2R | 4471000..4471129 | 17..146 | 100 | | Minus |
BS21332.pep Sequence
Translation from 16 to 1929
> BS21332.pep
MIAISDNSLGQRLKRLQLAFLLIALWDSTRALTVDNQLVSARNDCFERIA
LEAMLPFEKTFRTEDTNSLKMCKEKCLQAGEKCQAISFGVHRRGNGTCQL
SSEQYGSGGGGRPGGVIFDPDFDLYTRKTNCFDLSDNSIAAGPQPVPGPS
PISPGPTPLDLPNRPLDVGNTPVLVVNPTPHTSGSPPPPLGPSLPPPGVG
DRLYFSHDLYPLYKYPTLYESNYPSPNEEAYIPGGYAANAPEVDERYRPH
YGPIEPAEDEGIRPTPHSPPRPIFGLGYGNGYSYGSPERYTPPTGRPSSG
SSEERPSYAARPPRPTADRPEYPPGPPRPTADRPEYPPRPYEGSTPPSYG
PRPSPSYDPDREPRPDYTNRPDPPSLSPQVGYGMNGPSARPPPTSYDGPP
PPRDEYVRRNGSAMRPGDGYGGYDDDKTIATYFNPDDYMQGNNNRPMPSD
RDRDRNRDRLGYPMDEMKGDVAWRHYTVSGKPCRRSSPCAKNLITGFYSC
ETDASEVGSWDYCCKADHPCGYSKGFDYPWCFVGDESDQWRKCSDRYFPG
KNGTQPTHSHLGLPSAKEKQKHPHPHHSQPATAASSEYSQHPPRPGGLQS
LSDFAAARLWPVTYLYSEGPPNATEFSNFVDCNKESC*
BS21332.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:20:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42326-PE | 1376 | CG42326-PE | 1..499 | 1..491 | 2608 | 94.8 | Plus |
| CG42326-PE | 1376 | CG42326-PE | 1176..1376 | 433..637 | 984 | 85.9 | Plus |
| CG42326-PD | 952 | CG14748-PA | 752..952 | 433..637 | 984 | 85.9 | Plus |
| CG15021-PA | 420 | CG15021-PA | 127..394 | 143..402 | 244 | 31.6 | Plus |
| CG15021-PA | 420 | CG15021-PA | 40..276 | 143..420 | 215 | 30.8 | Plus |
| CG15021-PA | 420 | CG15021-PA | 183..415 | 143..388 | 215 | 30.6 | Plus |
| Muc91C-PB | 949 | CG7709-PB | 167..492 | 135..421 | 192 | 27.8 | Plus |
| Muc91C-PA | 950 | CG7709-PA | 168..493 | 135..421 | 192 | 27.8 | Plus |
| Muc91C-PB | 949 | CG7709-PB | 112..403 | 167..421 | 188 | 28.2 | Plus |
| CG15021-PA | 420 | CG15021-PA | 31..212 | 235..402 | 169 | 32.5 | Plus |
