BS21334.complete Sequence
422 bp assembled on 2011-01-18
GenBank Submission: KX803061
> BS21334.complete
GAAGTTATCAGTCGACATGATCTACTCGGACAATTGCTGTTGCTGCGTGG
ATCTGAAGTGCGGAAGCATCCTGATAGCCATCGTTGAGGTGCTAATACGT
GGACTAGATCGCTTCTTTGTTGATCGTGACAGCCTGCTGGGACTTTTTTC
CCTTGTGGTGAGCGGTATCTACGTTATCTGCTGCATTTTTCTACTGCTGG
GAGCAGTTCTGGGCCTGAGATATTTTCTGTTGCCTTACCTCTCAGTTTCC
TGCCTGCGGTTCTTCATTTTAGTTGCCGAGGGCGTGTTTGTAGCCACAGA
GGGCATCATGAATGAATATCTAGTTTTCGATATTCTTCAATCCCTTCTAG
GCTTGTACTTTTGGCTGGTGGTCTACTCCTATTATGATCGCTTAAAGGAC
GCGTGAAAGCTTTCTAGACCAT
BS21334.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:24:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34230-RA | 390 | CG34230-PA | 1..390 | 17..406 | 1950 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:24:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34230-RA | 546 | CG34230-RA | 48..437 | 17..406 | 1950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:24:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11861655..11861788 | 211..344 | 670 | 100 | Plus |
2R | 25286936 | 2R | 11861357..11861469 | 17..129 | 565 | 100 | Plus |
2R | 25286936 | 2R | 11861516..11861602 | 126..212 | 435 | 100 | Plus |
2R | 25286936 | 2R | 11861845..11861906 | 345..406 | 310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:24:05 has no hits.
BS21334.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:43 Download gff for
BS21334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34230-RA | 48..436 | 17..405 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:44 Download gff for
BS21334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34230-RA | 48..436 | 17..405 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:26 Download gff for
BS21334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34230-RA | 48..436 | 17..405 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:26 Download gff for
BS21334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11861357..11861465 | 17..125 | 100 | -> | Plus |
2R | 11861516..11861601 | 126..211 | 100 | -> | Plus |
2R | 11861656..11861788 | 212..344 | 100 | -> | Plus |
2R | 11861845..11861905 | 345..405 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:44 Download gff for
BS21334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7749350..7749410 | 345..405 | 100 | | Plus |
arm_2R | 7748862..7748970 | 17..125 | 100 | -> | Plus |
arm_2R | 7749021..7749106 | 126..211 | 100 | -> | Plus |
arm_2R | 7749161..7749293 | 212..344 | 100 | -> | Plus |
BS21334.pep Sequence
Translation from 16 to 405
> BS21334.pep
MIYSDNCCCCVDLKCGSILIAIVEVLIRGLDRFFVDRDSLLGLFSLVVSG
IYVICCIFLLLGAVLGLRYFLLPYLSVSCLRFFILVAEGVFVATEGIMNE
YLVFDILQSLLGLYFWLVVYSYYDRLKDA*
BS21334.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:01:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34230-PA | 129 | CG34230-PA | 1..129 | 1..129 | 667 | 100 | Plus |
CG43183-PA | 138 | CG43183-PA | 1..132 | 1..126 | 148 | 27.4 | Plus |